BS-seq analysis pipeline
☆47Mar 28, 2023Updated 3 years ago
Alternatives and similar repositories for BatMeth2
Users that are interested in BatMeth2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Discovery of communities in Pore-C concatemers☆16Feb 12, 2025Updated last year
- Differential methylation: Easy, Fast, Identification and ANnoTation☆19Dec 18, 2020Updated 5 years ago
- Optimized DMR analysis based on bimodal normal distribution model and cost function for regional methylation analysis.☆17Sep 13, 2021Updated 5 years ago
- ViewBS - a powerful toolkit for visualization of high-throughput bisulfite sequencing data☆90May 23, 2026Updated 5 months ago
- allele specific DNA methylation haplotype region☆13Oct 18, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- All codes associated with MendelPeaG2P project☆13Mar 5, 2025Updated last year
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆67Dec 22, 2023Updated 2 years ago
- COMETgazer mehylation analysis software suite☆10Jul 21, 2019Updated 7 years ago
- Tools for analyzing DNA methylation data☆47Oct 21, 2026Updated last week
- DNA methylation analysis notes from Ming Tang☆96Sep 19, 2019Updated 7 years ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆40Oct 1, 2026Updated last month
- Tools for working with WGBS data☆14Jul 3, 2017Updated 9 years ago
- GEMTools main repository☆17Jun 21, 2022Updated 4 years ago
- R package for DNA methylation analysis☆267Jul 15, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆36Feb 22, 2023Updated 3 years ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆29Jul 5, 2019Updated 7 years ago
- ☆15Oct 7, 2019Updated 7 years ago
- A tool to map bisulfite converted sequence reads and determine cytosine methylation states☆470Updated this week
- WGBS/NOMe-seq Data Processing & Differential Methylation Analysis☆148May 20, 2023Updated 3 years ago
- PriOritizing the Candidate genes by incorporating information of Knowledge-based gene sets, Effects of variants, GWAS and TWAS☆11May 14, 2021Updated 5 years ago
- Ceto is an NGS analysis system put together in a collaboration between the Bartom computational Lab, the Shilatifard lab, and other scien…☆25Oct 10, 2022Updated 4 years ago
- A (mostly) universal methylation extractor for BS-seq experiments.☆181Oct 20, 2026Updated last week
- Updated and optimized fork of BSMAP☆24Dec 28, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A versatile aligning pipeline for bisulfite sequencing data☆69Oct 30, 2018Updated 8 years ago
- ☆89Nov 11, 2020Updated 5 years ago
- HiChiP QC and data analysis☆13Mar 12, 2024Updated 2 years ago
- ☆19Apr 9, 2026Updated 6 months ago
- A pipeline for analyzing DNA methylation data from bisulfite sequencing.☆71Oct 7, 2022Updated 4 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Oct 2, 2026Updated last month
- WALT is a read mapping program for bisulfite sequencing DNA methylation studies.☆18Aug 23, 2022Updated 4 years ago
- ☆12Aug 28, 2020Updated 6 years ago
- Bioinformatic analysis of RNA-Seq, WGBS, and Hi-C in Arabidopsis☆10Jan 6, 2020Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- R package for DNA methylation analysis☆21Oct 2, 2026Updated last month
- Human Postmortem ASD RNA-seq Analysis Parikshak et al 2016☆17Sep 28, 2021Updated 5 years ago
- Identification of differentially methylated regions between multiple epigenomes from BS-treated read mappings via methylated region calli…☆13Sep 1, 2023Updated 3 years ago
- HiC uniform processing pipeline☆67Nov 8, 2023Updated 2 years ago
- A comprehensive, accurate and efficient solution for analysis of large scale base-resolution DNA methylation data☆17Apr 27, 2021Updated 5 years ago
- Parallel Genomic evaluations in R☆18Sep 26, 2024Updated 2 years ago
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆66May 9, 2025Updated last year