menghaowei / Detect-seqLinks
An unbiased method for genome-wide CBE off-targets assessment
☆13Updated 2 years ago
Alternatives and similar repositories for Detect-seq
Users that are interested in Detect-seq are comparing it to the libraries listed below
Sorting:
- direct comparison of circular and linear RNA expression☆23Updated 5 years ago
- circular RNA quantification tools☆31Updated last year
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆20Updated 6 months ago
- ☆23Updated last year
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Updated 5 months ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆24Updated 2 years ago
- Demultiplexes a fastq.☆48Updated 5 years ago
- MeRIPseqPipe：An integrated analysis pipeline for MeRIP-seq data based on Nextflow.☆42Updated last year
- splicing and feature maps for RBPs☆25Updated 3 years ago
- documentation for trackViewer☆29Updated 6 years ago
- A list of alternative splicing analysis resources☆47Updated 10 months ago
- ☆36Updated 3 years ago
- ChIP-seq pipeline tool for quality check, normalization, statistical analysis, and visualization of multiple ChIP-seq samples.☆24Updated 4 months ago
- ☆48Updated 3 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- Full-length transcriptome splicing and mutation analysis☆86Updated last year
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆84Updated 4 years ago
- An R package to process and analyze transcriptomic data☆19Updated 7 months ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆43Updated 3 months ago
- A legacy repository. Was replaced by distiller, cooler, and cooltools.☆21Updated 5 years ago
- ☆15Updated 3 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆40Updated last year
- bioinformatic pipeline for GLORI☆22Updated last year
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆32Updated 2 years ago
- Fork of the Polysolver project☆33Updated 6 years ago
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆14Updated 8 years ago
- ☆60Updated 6 months ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆20Updated 9 months ago
- pyJASPAR: A Pythonic interface to JASPAR transcription factor motifs☆34Updated 3 months ago
- APAlyzer is a toolkit for bioinformatic analysis of alternative polyadenylation (APA) events using RNA sequencing data. Our main approach…☆12Updated last year