ZhonghuiGu / HEALLinks
☆56Updated last year
Alternatives and similar repositories for HEAL
Users that are interested in HEAL are comparing it to the libraries listed below
Sorting:
- ☆54Updated last year
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆68Updated this week
- SGPPI: structure-aware prediction of protein-protein interactions in rigorous conditions with graph convolutional network☆14Updated 3 years ago
- ☆81Updated 5 months ago
- Multimodal Pretraining for Unsupervised Protein Representation Learning☆22Updated last year
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆33Updated 4 months ago
- ☆23Updated 2 years ago
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆68Updated last year
- A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)☆94Updated 10 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- ☆31Updated last year
- ☆92Updated 2 years ago
- ☆41Updated 5 months ago
- Graph Network for protein-protein interface☆120Updated last year
- Scalable Deep Learning for RNA Secondary Structure Prediction☆39Updated last month
- ☆53Updated last year
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆51Updated last year
- ☆15Updated 9 months ago
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆78Updated 6 months ago
- pLM-informed E(3) equivariant deep graph neural networks for protein-nucleic acid binding site prediction☆22Updated last year
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆121Updated 8 months ago
- Code for ICML 2024 paper "Learning to Predict Mutational Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical P…☆44Updated last year
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆34Updated 4 years ago
- ☆47Updated last year
- The code for "Learning Molecular Representation in a Cell"☆37Updated 8 months ago
- ☆38Updated 2 years ago
- Code for AAAI 2024 paper "PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein In…☆28Updated 9 months ago
- Official PyTorch implementation of "ProteinMAE: Masked Autoencoder for Protein Surface Self-supervised Learning".☆16Updated last year
- ☆46Updated last year
- An official implementation of Protein Representation Learning via Knowledge Enhanced Primary Structure Reasoning☆29Updated 2 years ago