Alternatives and similar repositories for DeepProSite

Users that are interested in DeepProSite are comparing it to the libraries listed below

• ChenPy00 / PPB-Affinity
  Baseline model for PPB-Affinity benchmark data
  ☆29Updated 3 months ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆32Updated 2 years ago
• jivankandel / PUResNet
  Predicting protein-ligand binding sites using deep convolutional neural network
  ☆50Updated 11 months ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆33Updated 10 months ago
• Huatsing-Lau / PPB-Affinity-DataPrepWorkflow
  workflow used to prepare PPB-Affinity database
  ☆27Updated last year
• ELELAB / PDBminer
  scripts to find PBD structures for cancer driver proteins
  ☆31Updated 6 months ago
• ohuelab / ColabDesign-cyclic-binder
  ☆34Updated 2 years ago
• zhangruochi / pepland
  ☆22Updated 6 months ago
• luwei0917 / AlphaFold3_PPI
  ☆15Updated last year
• wangxr0526 / EasIFA
  Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”
  ☆40Updated 6 months ago
• NasimAbdollahi / NodeCoder
  NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.
  ☆33Updated last year
• BFeng14 / ActFound
  Official implementation for ActFound (Nature Machine Intelligence): A bioactivity foundation model using pairwise meta-learning
  ☆43Updated 10 months ago
• luoyunan / KDBNet
  Kinase–drug binding prediction with calibrated uncertainty quantification
  ☆23Updated last year
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated last year
• MolecularAI / PepINVENT
  ☆46Updated 5 months ago
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆47Updated last year
• iipharma / transpharmer-repo
  ☆39Updated 5 months ago
• ak422 / DDAffinity
  ☆22Updated 3 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆38Updated last year
• tiantz17 / PocketAnchor
  Learning Structure-based Pocket Representations for Protein-Ligand Interaction Prediction
  ☆34Updated 2 years ago
• skalyaanamoorthy / PSLMs
  ☆19Updated 10 months ago
• bzho3923 / ProtLGN
  ☆31Updated last year
• AspirinCode / GENiPPI
  Interface-aware molecular generative framework for protein-protein interaction modulators
  ☆15Updated 8 months ago
• ZhiGroup / FDA
  Folding-Docking-Affinity framework for protein-ligand affinity prediction
  ☆27Updated 5 months ago
• SigmaGenX / TamGen
  ☆38Updated 3 months ago
• GENTEL-lab / AuroBind
  ☆29Updated 2 weeks ago
• CataAI / PoseX
  PoseX: A Molecular Docking Benchmark
  ☆49Updated 2 months ago
• EDAPINENUT / GeoAB
  This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)
  ☆40Updated last year
• liuyf020419 / SCUBA-D
  ☆61Updated last year
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆23Updated last year