☆35Dec 15, 2023Updated 2 years ago
Alternatives and similar repositories for DeepProSite
Users that are interested in DeepProSite are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The central entry point to the P2Rank project with links to the individual projects, including references to documentation, datasets, etc…☆14Feb 11, 2026Updated 8 months ago
- ☆11Mar 28, 2024Updated 2 years ago
- SE(3) diffusion models for generating CDR loops☆10Feb 6, 2024Updated 2 years ago
- Protein-peptide docking with ESMFold language model☆16May 30, 2026Updated 5 months ago
- ☆47Sep 16, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆16Aug 22, 2025Updated last year
- Bi-Encoder approach for large-scale protein-peptide binding search☆13Jun 14, 2024Updated 2 years ago
- Data and code required to reach the main conclusions of the fastsmcg paper☆11Sep 19, 2023Updated 3 years ago
- CovDocker: Benchmarking Covalent Drug Design with Tasks, Datasets, and Solutions (KDD'25 research track accepted)☆17Aug 6, 2025Updated last year
- Cyclic peptide binder design using a fragment docking and assembling strategy☆12May 20, 2025Updated last year
- SubPEx (Sub-Pocket Explorer) is a tool to enhance ensemble (multiple-receptor/relaxed-complex) virtual screening. It uses weighted ensemb…☆18Jun 30, 2025Updated last year
- ☆39Aug 28, 2023Updated 3 years ago
- For the purpose of post progressing of MD carried by gromacs☆24Jul 2, 2025Updated last year
- MEGADOCK on Google Colaboratory☆20Oct 2, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Clustering of SES virtual probes for pocket generation and ranking via Isolation Forest☆14Mar 22, 2023Updated 3 years ago
- ☆57Aug 3, 2024Updated 2 years ago
- ☆11Jan 31, 2026Updated 9 months ago
- ☆25May 26, 2025Updated last year
- ☆121Dec 7, 2022Updated 3 years ago
- Protein binding site prediction with transformers☆18Jul 7, 2026Updated 3 months ago
- ☆54Dec 3, 2023Updated 2 years ago
- Python package to manage protein structures and their annotations☆46Mar 18, 2026Updated 7 months ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆47Apr 22, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Pharmacophore Elucidation with Convolutional Neural Networks and Reinforcement Learning☆17Apr 7, 2025Updated last year
- EViS: an Enhanced Virtual Screening Approach based on Pocket Ligand Similarity☆14Dec 7, 2021Updated 4 years ago
- ☆18Mar 13, 2024Updated 2 years ago
- Code for ApoDock☆22Apr 7, 2025Updated last year
- Metal and Water prediction☆16Feb 5, 2025Updated last year
- ☆75Feb 13, 2026Updated 8 months ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Oct 27, 2021Updated 5 years ago
- Comprehensive Benchmark for Protein-Peptide Complex Structure Prediction with AlphaFold3☆19Sep 4, 2025Updated last year
- https://grasp.ufv.br/☆17Jul 6, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Prediction of ligand binding site☆15Feb 3, 2026Updated 8 months ago
- Sequence-based prediction of peptide-TCR interactions using paired chain data☆15Feb 2, 2026Updated 8 months ago
- Protein hallucination and inpainting with RoseTTAFold☆284Mar 30, 2023Updated 3 years ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆141Oct 30, 2025Updated last year
- ☆33Dec 12, 2024Updated last year
- A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design☆22Feb 11, 2025Updated last year
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆143Jan 28, 2026Updated 9 months ago