vttresearch / ActSeekLinks
Protein discovery tool for mining in the Alphafold database based on the position of few amino acids.
☆28Updated this week
Alternatives and similar repositories for ActSeek
Users that are interested in ActSeek are comparing it to the libraries listed below
Sorting:
- GTalign, high-performance protein structure alignment, superposition and search☆52Updated 5 months ago
- ☆23Updated 2 years ago
- Machine learning prediction of enzyme optimum pH☆50Updated 8 months ago
- Fast protein domain structure embedding+search tool☆27Updated 4 months ago
- ☆47Updated last year
- A domain parser for Alphafold models☆46Updated 2 years ago
- ☆32Updated last year
- Rendering protein mutation movies from predicted 3D structures☆20Updated 2 years ago
- ☆30Updated last week
- ☆23Updated 2 months ago
- Detection of remote homology by comparison of protein language model representations☆61Updated last year
- A tool for protein and protein complex structure prediction.☆29Updated 7 months ago
- ☆18Updated 8 months ago
- Benchmarking scripts for Gaia☆12Updated 9 months ago
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity☆20Updated 4 months ago
- Local homology search powered by ESM-2 language model, foldseek, hhsuite, and hmmer.☆16Updated last year
- ☆48Updated last month
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆17Updated 2 years ago
- Long disorder consensus predictor☆17Updated 4 months ago
- Python framework for doing ancestral sequence reconstruction☆42Updated last year
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆35Updated 2 years ago
- Dual-core Multi-agent Learning Framework For EC Number Prediction☆21Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- Geometry-aware protein binding site predictor☆25Updated last year
- Generator and regressor neural networks for antimicrobial peptides☆25Updated last year
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆61Updated 9 months ago
- ☆30Updated 2 years ago
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆77Updated 4 months ago
- ColabFold protocol☆56Updated last year
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year