vttresearch / ActSeekLinks
Protein discovery tool for mining in the Alphafold database based on the position of few amino acids.
☆24Updated 2 months ago
Alternatives and similar repositories for ActSeek
Users that are interested in ActSeek are comparing it to the libraries listed below
Sorting:
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity☆20Updated 8 months ago
- GTalign, high-performance protein structure alignment, superposition and search☆49Updated 2 weeks ago
- ☆22Updated 2 years ago
- Fast protein domain structure embedding+search tool☆25Updated 3 months ago
- Machine learning prediction of enzyme optimum pH☆44Updated 4 months ago
- ☆22Updated 3 months ago
- ☆30Updated last year
- ☆43Updated 11 months ago
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆17Updated 2 years ago
- Detection of remote homology by comparison of protein language model representations☆54Updated 8 months ago
- A domain parser for Alphafold models☆40Updated last year
- Generator and regressor neural networks for antimicrobial peptides☆25Updated last year
- Python framework for doing ancestral sequence reconstruction☆41Updated last year
- Rendering protein mutation movies from predicted 3D structures☆20Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆91Updated last year
- Long disorder consensus predictor☆16Updated 5 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆76Updated last week
- ColabFold protocol☆52Updated 10 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆41Updated 3 months ago
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆73Updated 8 months ago
- Protein Structure Archiver☆12Updated last year
- A tool for protein and protein complex structure prediction.☆29Updated 2 months ago
- ☆48Updated 2 weeks ago
- Local homology search powered by ESM-2 language model, foldseek, hhsuite, and hmmer.☆15Updated 7 months ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Updated last year
- ☆30Updated last year
- ☆20Updated 5 months ago
- ☆27Updated last month
- Evolutionary conservation estimation of residues or nucleotides☆47Updated 3 years ago
- Fragment binding prediction with ColabFold☆37Updated 5 months ago