hesther / enzymemapLinks
Python package to atom map, correct and suggest enzymatic reactions
☆40Updated last year
Alternatives and similar repositories for enzymemap
Users that are interested in enzymemap are comparing it to the libraries listed below
Sorting:
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆35Updated 4 years ago
- CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes☆34Updated 3 weeks ago
- Machine learning prediction of enzyme optimum pH☆44Updated 2 months ago
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- Ultra-fast in-silico structure mutation☆34Updated 3 months ago
- Physical energy function for protein sequence design☆31Updated 2 years ago
- ☆19Updated last year
- GTalign, high-performance protein structure alignment, superposition and search☆46Updated 2 weeks ago
- The official codebase of peptidy, a peptide processing tool for machine learning.☆31Updated 2 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆42Updated 2 years ago
- Python package to manage protein structures and their annotations☆43Updated last year
- Fast and accurate protein domain segmentation using Invariant Point Attention☆40Updated last month
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆57Updated last month
- Efficient manipulation of protein structures in Python☆55Updated 8 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆27Updated last year
- ☆17Updated 3 years ago
- Fragment binding prediction with ColabFold☆35Updated 3 months ago
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆29Updated 2 years ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆58Updated 4 months ago
- ☆26Updated 2 months ago
- ☆20Updated last year
- ☆38Updated 9 months ago
- Graph Network for protein-protein interface including language model features☆32Updated last year
- ☆73Updated 10 months ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆73Updated 10 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆67Updated 10 months ago
- pyFoldX: python bindings for FoldX.☆48Updated 3 years ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- ☆70Updated 3 months ago
- Clusters protein chains based on CA distance difference☆14Updated 5 months ago