BioLiP2 database curation and web interface
☆30Jun 19, 2025Updated 9 months ago
Alternatives and similar repositories for mmCIF2BioLiP
Users that are interested in mmCIF2BioLiP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Datasets for P2Rank project. https://github.com/rdk/p2rank☆26Nov 8, 2024Updated last year
- A benchmark for 3D biomolecular structure prediction models☆69May 11, 2025Updated 10 months ago
- ☆13Jun 5, 2024Updated last year
- Metal and Water prediction☆13Feb 5, 2025Updated last year
- Public version for Distance-AF☆31Aug 17, 2025Updated 7 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆91Feb 14, 2024Updated 2 years ago
- Deep learning + physical modeling for 3D protein metal ion binding prediction☆13Feb 24, 2025Updated last year
- ☆17Oct 26, 2024Updated last year
- A light-weight PyTorch extension for equivariant deep learning☆18Feb 20, 2025Updated last year
- This is an official implementation for "MMSite: A Multi-modal Framework for the Identification of Active Sites in Proteins".☆18Jan 4, 2025Updated last year
- ☆24Dec 2, 2024Updated last year
- Deploying synthetic coevolution and machine learning to engineer protein-protein interactions☆16Jul 30, 2023Updated 2 years ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 4 months ago
- Lightweight induced fit docking☆21May 22, 2023Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆74Feb 24, 2025Updated last year
- ☆42Oct 1, 2023Updated 2 years ago
- ☆20Jan 31, 2023Updated 3 years ago
- [ICLR 2024 Spotlight] The official repo for the paper "De novo Protein Design using Geometric Vector Field Networks".☆30Aug 23, 2024Updated last year
- Official repository of ReactZyme☆40Oct 12, 2024Updated last year
- ☆44Jan 10, 2024Updated 2 years ago
- Expert-Guided Protein Language Models enable Accurate and Blazingly Fast Fitness Prediction☆17Feb 6, 2026Updated last month
- RNAPro is a state-of-the-art RNA 3D folding model developed in collaboration with the hosts and winners of the Stanford RNA 3D Folding Ka…☆74Jan 17, 2026Updated 2 months ago
- Plausibility checks for generated molecule poses.☆363Mar 7, 2026Updated 2 weeks ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Python macromolecular parsing (with .pdb/.cif/.mmtf parsing and production)☆106Dec 7, 2023Updated 2 years ago
- ☆41Jun 12, 2025Updated 9 months ago
- SpatialPPIv2: Enhancing protein–protein interaction prediction through graph neural networks with protein language models.☆25Jan 8, 2026Updated 2 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆43May 15, 2024Updated last year
- NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model☆327Oct 6, 2025Updated 5 months ago
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆21May 20, 2019Updated 6 years ago
- MONN: a Multi-Objective Neural Network for Predicting Pairwise Non-Covalent Interactions and Binding Affinities between Compounds and Pro…☆104Oct 6, 2020Updated 5 years ago
- ☆47Sep 16, 2024Updated last year
- Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learning☆23Mar 19, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆176Feb 4, 2026Updated last month
- Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and …☆14Jun 25, 2023Updated 2 years ago
- Cryptic pocket prediction using AlphaFold 2☆24Nov 27, 2022Updated 3 years ago
- Personal course notes (in Chinese) for THU CST.☆13Jun 23, 2018Updated 7 years ago
- ☆78Nov 25, 2025Updated 4 months ago
- Protein-ligand structure prediction☆239Jul 31, 2025Updated 7 months ago
- Web cards/apps describing peptides☆30Apr 26, 2023Updated 2 years ago