Reproducible Workflows, curated at the Fred Hutch
☆12Jan 21, 2026Updated 2 months ago
Alternatives and similar repositories for reproducible-workflows
Users that are interested in reproducible-workflows are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Oct 27, 2021Updated 4 years ago
- 📊Evaluating, filtering, comparing, and visualising VCF☆29Mar 9, 2023Updated 3 years ago
- Amazon Web Services Bundle Package☆15Jan 12, 2020Updated 6 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Sep 13, 2023Updated 2 years ago
- SciWiki: Collective KnowledgeBase for Scientific Data and Use☆41Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Convert TCR gene names☆15Dec 26, 2025Updated 3 months ago
- Accelerate the generation of personalized proteomes from a Variant calling format (VCF) file and a reference proteome using graphical pro…☆21Apr 28, 2023Updated 2 years ago
- A collection of reusable WDL tasks. Category:Other☆88Mar 10, 2026Updated 2 weeks ago
- R Interface to the NCBI SRA metadata☆23Nov 19, 2018Updated 7 years ago
- ☆15Apr 26, 2022Updated 3 years ago
- ☆15Jan 16, 2024Updated 2 years ago
- Nextflow pipeline for Mutect2 somatic variant calling best practices☆23Jun 14, 2024Updated last year
- ☆13Aug 14, 2018Updated 7 years ago
- DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions☆11Jul 8, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ActiveDriverDB☆12May 1, 2023Updated 2 years ago
- Example application running camunda with spring boot, written in kotlin☆15Jun 2, 2022Updated 3 years ago
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆71Apr 12, 2024Updated last year
- Scalable genomic analysis pipelines, written in WDL☆12Mar 11, 2026Updated 2 weeks ago
- UMCU Genetics Nextflow modules☆30Oct 25, 2024Updated last year
- An emacs package to control kubernetes, with TRAMP integration☆31Sep 24, 2020Updated 5 years ago
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Dec 25, 2023Updated 2 years ago
- Supplementary files for paper "Detection and removal of barcode swapping in single-cell RNAseq".☆11Jul 5, 2018Updated 7 years ago
- DRAGEN Tumor/Normal workflow post-processing☆24Sep 18, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Manage Files Across Sessions☆13Oct 30, 2025Updated 4 months ago
- A handy cheatsheet for magit, the excellent emacs mode for git.☆23Oct 30, 2015Updated 10 years ago
- Colour and fill scales for 'ggplot2' using colour spaces.☆15Feb 24, 2021Updated 5 years ago
- REST service to connect to Snowflake DB and do CRUD operations☆14Jul 12, 2025Updated 8 months ago
- ☆13Nov 30, 2018Updated 7 years ago
- ☆11Sep 7, 2023Updated 2 years ago
- NGS perl modules☆10Updated this week
- Combinatory logic runtime.☆18Updated this week
- ☆28Oct 5, 2018Updated 7 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Collecting Datomic Transactor + JVM metrics for consumption by Prometheus by offering a web endpoint.☆15Nov 18, 2020Updated 5 years ago
- Ligand-Receptor docking with AutoDock Vina☆12Mar 21, 2024Updated 2 years ago
- Library and tool for annotating MAF files using Genome Nexus Webserver API☆11Feb 25, 2026Updated last month
- A web app to create new drake projects☆20Feb 6, 2021Updated 5 years ago
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Apr 17, 2020Updated 5 years ago
- ☆18Dec 8, 2021Updated 4 years ago
- Source code for the BUDE Alanine Scan web application.☆12May 27, 2025Updated 10 months ago