all-of-us / ukb-cross-analysis-demo-project
Workbench demo project: cross-analysis of AoU and UKB.
☆12Updated 2 years ago
Alternatives and similar repositories for ukb-cross-analysis-demo-project
Users that are interested in ukb-cross-analysis-demo-project are comparing it to the libraries listed below
Sorting:
- Phenotyping algorithms for common biomarkers in primary care EHR for UK Biobank☆24Updated 4 years ago
- ukbREST: efficient and streamlined data access for reproducible research of large biobanks☆38Updated 3 years ago
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆35Updated 5 months ago
- Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records☆34Updated 2 years ago
- Software implementing the Latent Causal Variable Model☆63Updated 4 years ago
- ☆10Updated 4 years ago
- Text matching UK Biobank Self-Reported medication descriptions for medication classification☆24Updated 3 years ago
- Use R to generate a database containing the UK Biobank data schemas from http://biobank.ctsu.ox.ac.uk/crystal/schema.cgi☆20Updated 4 years ago
- A Python module for loading phenotypic and genetic data from the UK Biobank.☆35Updated 3 years ago
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆19Updated 3 years ago
- ☆14Updated 3 months ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆31Updated last year
- GENetic Effect-Size distribution Inference from Summary-level data☆14Updated 4 years ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆26Updated last year
- Python scripts to extract and pre-process UKB data☆31Updated 6 years ago
- Python script for multivariate GWAS meta-analysis☆24Updated 5 months ago
- ☆31Updated 7 months ago
- Adding random effects model to the METAL software☆13Updated last year
- Codes for our NPNT paper at Nature Metabolism☆16Updated last year
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Updated 4 years ago
- Helper functions for UK Biobank data☆12Updated 3 years ago
- Specification for the GWAS-VCF format (manuscript in preparation)☆24Updated 3 years ago
- Data analysis scripts for "Atlas of plasma NMR biomarkers for health and disease in 118,461 individuals from the UK Biobank".☆13Updated 2 years ago
- Scripts used for generating Neale Lab UKB results☆19Updated 2 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆49Updated 2 months ago
- R package for UK Biobank data wrangling.☆20Updated last year
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆48Updated 4 years ago
- Prepare UK Biobank Electronic Health Record data for research☆26Updated 2 years ago
- ☆11Updated 2 years ago
- A rapido and lightweight method for PGS computation☆14Updated 2 months ago