EmilyAlsentzer / rare-disease-simulationLinks
Simulate patients with rare genetic conditions
☆22Updated last year
Alternatives and similar repositories for rare-disease-simulation
Users that are interested in rare-disease-simulation are comparing it to the libraries listed below
Sorting:
- A Python library to work with, analyze, filter and inspect the Human Phenotype Ontology☆29Updated 3 months ago
- ☆14Updated 8 months ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆70Updated 3 months ago
- ☆17Updated 6 years ago
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆55Updated last month
- ☆26Updated last year
- Knowledge-primed neural networks☆38Updated 2 years ago
- Rareservoir Database Tools☆15Updated 2 years ago
- Clinical interpretation of somatic mutations in cancer☆46Updated 4 months ago
- The light frontend for BioChatter, in pure Python☆54Updated 2 weeks ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆32Updated 3 months ago
- scDrug: From scRNA-seq to Drug Repositioning☆33Updated 2 years ago
- Code space for 'Evaluation of large language models for discovery of gene set function'☆36Updated 6 months ago
- CpGPT: a Foundation Model for DNA Methylation.☆43Updated last week
- APA Regression Net - Predict and Engineer Alternative Polyadenylation☆39Updated 3 years ago
- Functional Associations using Variational Autoencoders☆39Updated 4 months ago
- ☆32Updated 5 months ago
- SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence☆25Updated 7 months ago
- mantis-ml: Stochastic semi-supervised learning to prioritise genes from high throughput genomic screens☆30Updated last year
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆28Updated 2 months ago
- ☆54Updated this week
- Explore the cancer relevance of your gene list☆51Updated 3 months ago
- Open Targets python framework for post-GWAS analysis☆39Updated last week
- ☆14Updated 2 months ago
- ACTIONet single-cell analysis framework☆42Updated 9 months ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases☆56Updated 9 months ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆82Updated last month
- Code and documentation for the curation of cellxgene datasets☆46Updated this week
- A combined deep learning tool for automated recognition of human phenotype ontology☆24Updated 2 years ago