EmilyAlsentzer / rare-disease-simulation
Simulate patients with rare genetic conditions
☆17Updated last year
Related projects ⓘ
Alternatives and complementary repositories for rare-disease-simulation
- ☆19Updated 11 months ago
- A Python library to work with, analyze, filter and inspect the Human Phenotype Ontology☆25Updated 5 months ago
- Open Targets python framework for post-GWAS analysis☆33Updated this week
- Explore the cancer relevance of your gene list☆49Updated 2 months ago
- Functional Associations using Variational Autoencoders☆38Updated last week
- A combined deep learning tool for automated recognition of human phenotype ontology☆20Updated last year
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseases☆45Updated 3 months ago
- ☆32Updated last year
- Materials and scripts for building cell type encyclopedia table☆15Updated 2 months ago
- Clinical interpretation of somatic mutations in cancer☆42Updated 2 years ago
- Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.☆23Updated 3 months ago
- Code and documentation for the curation of cellxgene datasets☆38Updated this week
- Python library for extracting HPO encoded phenotypes from text☆27Updated 7 months ago
- ☆13Updated 5 years ago
- Contains tools used by cBioPortal data curators when preparing data for upload into the datahub repos.☆18Updated this week
- Multiple trajectory alignment of time-series data☆10Updated last year
- repository containing analysis scripts and auxiliary files☆30Updated 4 years ago
- A phenotype-based tool for variant prioritization in WES and WGS data☆37Updated 2 years ago
- Processing workflow for COVID-19 single cell data☆17Updated 2 years ago
- code to run sei and obtain sei and sequence class predictions☆92Updated last year
- APA Regression Net - Predict and Engineer Alternative Polyadenylation☆37Updated 3 years ago
- The light frontend for BioChatter, in pure Python☆50Updated 2 months ago
- metadata and data from the database☆38Updated 4 years ago
- ☆10Updated 2 months ago
- Phenome Exome Association and Correlation Of Key phenotypes☆24Updated 3 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- Text-mined knowledgebase for drivers, oncogenes and tumor suppressors in cancer☆40Updated last year
- Explore and download data from the recount3 project☆31Updated 6 months ago
- A resource of adverse drug effects extracted from FDA structured product labels☆63Updated last month
- CaDRReS-Sc is a framework for analyzing drug response heterogeneity based on single-cell RNA-seq data☆14Updated 2 years ago