anergictcell / pyhpo
A Python library to work with, analyze, filter and inspect the Human Phenotype Ontology
☆27Updated 2 months ago
Alternatives and similar repositories for pyhpo:
Users that are interested in pyhpo are comparing it to the libraries listed below
- Python library for extracting HPO encoded phenotypes from text☆29Updated last year
- ☆32Updated 4 months ago
- LIkelihood Ratio Interpretation of Clinical AbnormaLities☆28Updated 2 weeks ago
- A phenotype-based tool for variant prioritization in WES and WGS data☆38Updated 2 years ago
- Clinical interpretation of somatic mutations in cancer☆45Updated 2 months ago
- Platform for Oncogenomic Reporting and Interpretation (PORI)☆31Updated 10 months ago
- Associations of genomic features, drugs and diseases☆48Updated 2 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆80Updated 5 months ago
- A combined deep learning tool for automated recognition of human phenotype ontology☆24Updated 2 years ago
- ☆17Updated last year
- ☆13Updated 6 months ago
- Simulate patients with rare genetic conditions☆21Updated last year
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆30Updated last month
- phenotype-based prioritization of candidate genes for human diseases☆65Updated 2 years ago
- Relative Expression Ordering Analysis (REOA) package☆20Updated 2 years ago
- Phenotype driven gene prioritization for HPO☆45Updated 3 years ago
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseases☆48Updated 5 months ago
- ☆23Updated 6 years ago
- Knowledge-primed neural networks☆36Updated 2 years ago
- Functional Associations using Variational Autoencoders☆39Updated 3 months ago
- Tissue-specific variant effect predictions on splicing☆42Updated last year
- ☆44Updated this week
- ARCHS4 RNA-seq processing scripts and web server pages.☆57Updated 4 years ago
- ☆14Updated 5 years ago
- MeRIPseqPipe:An integrated analysis pipeline for MeRIP-seq data based on Nextflow.☆38Updated 11 months ago
- Microbial analysis in TCGA data☆90Updated last year
- Predicting gene expression levels from genomic sequences☆53Updated 4 years ago
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆46Updated 2 years ago
- In-silico method written in Python and R to determine HLA genotypes of a sample. seq2HLA takes standard RNA-Seq sequence reads in fastq f…☆49Updated last year
- ☆72Updated 3 years ago