Alternatives and similar repositories for rsvr:

Users that are interested in rsvr are comparing it to the libraries listed below

• aeeckhou / shallowHRD
  This method uses shallow Whole Genome Sequencing (sWGS) and the segmentation of a genomic profile to assess the Homologous Recombination …
  ☆33Updated 7 months ago
• pgxcentre / region-plot
  A tool to plot significant regions of GWAS
  ☆29Updated 2 years ago
• monarch-initiative / Squirls
  Interpretable prioritization of splice variants in diagnostic next-generation sequencing
  ☆16Updated 9 months ago
• WGLab / CancerVar
  Clinical interpretation of somatic mutations in cancer
  ☆44Updated this week
• mhguo1 / TRAPD
  Burden testing against public controls
  ☆50Updated 11 months ago
• molgenis / capice
  ☆23Updated 2 months ago
• farkkilab / scarHRD
  Package for calculation of Homologous Recombination Deficiency
  ☆13Updated 4 years ago
• nriddiford / cnvPlotteR
  Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec
  ☆13Updated 4 years ago
• xihaoli / STAARpipeline-Tutorial
  The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…
  ☆28Updated 2 months ago
• xihaoli / STAARpipeline
  An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline
  ☆62Updated last week
• ChrisMaherLab / ClonEvol
  ☆13Updated 7 years ago
• stormlovetao / eQTLQC
  ☆25Updated 4 years ago
• Phillip-a-richmond / AnnotateVariants
  This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …
  ☆17Updated last year
• mskcc / lohhla
  Fork from https://bitbucket.org/mcgranahanlab/lohhla/src, modified for MSKCC needs
  ☆30Updated last year
• deepomicslab / SpecHLA
  SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …
  ☆41Updated this week
• pughlab / bamgineer
  Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets
  ☆37Updated 4 years ago
• FJD-CEPH / aCNViewer
  Comprehensive genome-wide visualization of absolute copy number and copy neutral variations
  ☆29Updated 5 years ago
• nghiavtr / FuSeq
  ☆33Updated 2 years ago
• mhalushka / miRge3.0
  Comprehensive analysis of small RNA sequencing data
  ☆30Updated 8 months ago
• umccr / vcf_stuff
  📊Evaluating, filtering, comparing, and visualising VCF
  ☆27Updated last year
• olgabot / sj2psi
  Convert RNA-STAR aligner "SJ.out.tab" files to "Percent spliced-in" (Psi) scores
  ☆8Updated 9 years ago
• cancer-genomics / reproduce_lucas_wflow
  ☆28Updated 11 months ago
• ImperialCardioGenetics / UTRannotator
  VEP Plugin to annotate high-impact five prime UTR variants
  ☆27Updated 5 months ago
• getzlab / MutSig2CV
  MutSig2CV from Lawrence et al. 2014
  ☆31Updated 4 years ago
• cphgeno / CNVbench
  Benchmarking of CNV calling tools
  ☆18Updated 5 years ago
• CCBR / Pipeliner
  An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.
  ☆4Updated last year
• shbrief / CNVWorkflow_Code
  CNV analysis workflow code for the manuscript
  ☆13Updated 4 years ago
• statgen / gotcloud
  Genomes on the Cloud, Mapping & Variant Calling Pipelines
  ☆33Updated 7 years ago
• markowetzlab / Drews2022_CIN_Compendium
  Main repository for Drews et al. (Nature, 2022)
  ☆39Updated last year
• huyustats / SCATS
  A statistical tool to detect differential alternative splicing events using single-cell RNA-seq
  ☆22Updated last year