turrogroup / rsvrLinks
Rareservoir Database Tools
☆15Updated 2 years ago
Alternatives and similar repositories for rsvr
Users that are interested in rsvr are comparing it to the libraries listed below
Sorting:
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆66Updated 5 months ago
- Comprehensive analysis of small RNA sequencing data☆33Updated 3 months ago
- Clinical interpretation of somatic mutations in cancer☆47Updated 6 months ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆61Updated 8 months ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆50Updated 2 weeks ago
- VEP Plugin to annotate high-impact five prime UTR variants☆27Updated last year
- ☆21Updated last week
- ☆45Updated 2 years ago
- This method uses shallow Whole Genome Sequencing (sWGS) and the segmentation of a genomic profile to assess the Homologous Recombination …☆34Updated last year
- A Nextflow workflow for HLA typing using HLA-HD☆11Updated last year
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆30Updated 9 months ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- RNA editing tests☆17Updated 4 years ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- Fork from https://bitbucket.org/mcgranahanlab/lohhla/src, modified for MSKCC needs☆31Updated 2 years ago
- RepEnrich is a method to estimate repetitive element enrichment using high-throughput sequencing data.☆28Updated 3 years ago
- An R package to time somatic mutations☆62Updated 4 years ago
- Long-read Isoform Quantification and Analysis☆38Updated 5 months ago
- A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to …☆23Updated 3 years ago
- ☆30Updated last year
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆35Updated 3 years ago
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆52Updated 3 years ago
- A Snakemake workflow and MrBiomics module for performing genomic region set and gene set enrichment analyses using LOLA, GREAT, GSEApy, p…☆42Updated 3 weeks ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆41Updated 8 months ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- MutSig2CV from Lawrence et al. 2014☆31Updated 5 years ago
- Data of genome annotation from full-stack ChromHMM model trained with 1032 datasets from 127 reference epigenomes☆37Updated last year
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆53Updated last year
- ☆26Updated 4 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆40Updated 3 years ago