turrogroup / rsvrLinks
Rareservoir Database Tools
☆16Updated 2 years ago
Alternatives and similar repositories for rsvr
Users that are interested in rsvr are comparing it to the libraries listed below
Sorting:
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆67Updated 7 months ago
- This method uses shallow Whole Genome Sequencing (sWGS) and the segmentation of a genomic profile to assess the Homologous Recombination …☆34Updated last month
- Clinical interpretation of somatic mutations in cancer☆49Updated 8 months ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated 3 weeks ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆51Updated 3 weeks ago
- ☆21Updated 3 weeks ago
- VEP Plugin to annotate high-impact five prime UTR variants☆27Updated last year
- ☆31Updated last year
- Comprehensive analysis of small RNA sequencing data☆33Updated 5 months ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- ONCOCNV - a package to detect copy number changes in Targeted Deep Sequencing and Exome-seq data☆25Updated 2 years ago
- Mutational signature analysis for low statistics SNV data☆64Updated last year
- Burden testing against public controls☆50Updated last year
- Fork from https://bitbucket.org/mcgranahanlab/lohhla/src, modified for MSKCC needs☆31Updated 2 years ago
- A Nextflow workflow for HLA typing using HLA-HD☆11Updated last year
- ☆36Updated 6 years ago
- MutSig2CV from Lawrence et al. 2014☆33Updated 5 years ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- ☆54Updated 2 years ago
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆18Updated 6 years ago
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆52Updated 3 years ago
- A continually expanding collection of RNA-seq tools☆52Updated 3 weeks ago
- QDNAseq package for Bioconductor☆52Updated last year
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆36Updated 4 years ago
- Fast method for inferring cancer clonal population structure from SNV data.☆60Updated last month
- ☆39Updated 5 years ago
- ☆13Updated 8 years ago
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆21Updated 7 months ago
- DNA methylation studies of mammalian species☆37Updated 2 months ago
- An R package for predicting HR deficiency from mutation contexts☆29Updated 8 months ago