turrogroup / rsvr
Rareservoir Database Tools
☆14Updated 2 years ago
Alternatives and similar repositories for rsvr:
Users that are interested in rsvr are comparing it to the libraries listed below
- This method uses shallow Whole Genome Sequencing (sWGS) and the segmentation of a genomic profile to assess the Homologous Recombination …☆34Updated 8 months ago
- VEP Plugin to annotate high-impact five prime UTR variants☆26Updated 7 months ago
- Burden testing against public controls☆50Updated last year
- Clinical interpretation of somatic mutations in cancer☆45Updated last month
- ☆34Updated 5 years ago
- ☆23Updated last year
- Comprehensive analysis of small RNA sequencing data☆31Updated 9 months ago
- SMN1 copy-number and sequence variant analysis from next generation sequencing data☆22Updated last year
- Code accompanying The Evolutionary history of 2,658 cancers☆46Updated 3 years ago
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆22Updated 2 months ago
- Interpretable prioritization of splice variants in diagnostic next-generation sequencing☆16Updated 10 months ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆28Updated 3 months ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- Dirichlet Process based methods for subclonal reconstruction of tumours☆29Updated last week
- Snakemake workflow for somatic mutation detection without matched normal samples☆11Updated 2 years ago
- ☆38Updated 5 years ago
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆19Updated 5 years ago
- ☆23Updated 6 years ago
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆26Updated last week
- Comprehensive genome-wide visualization of absolute copy number and copy neutral variations☆29Updated 5 years ago
- ☆13Updated 7 years ago
- Joint calling of gVCF, following GATK4 Best Practices☆12Updated 5 years ago
- RepEnrich is a method to estimate repetitive element enrichment using high-throughput sequencing data.☆27Updated 3 years ago
- Script used to identify de novo variants from sequencing data.☆12Updated 8 years ago
- ☆28Updated last year
- Filtering of PDX samples for mouse derived reads☆27Updated 2 years ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆42Updated this week
- MutSig2CV from Lawrence et al. 2014☆31Updated 4 years ago
- Genomes on the Cloud, Mapping & Variant Calling Pipelines☆34Updated 8 years ago
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆50Updated 2 years ago