DessimozLab / phylo-io
Phylo.IO JS tree viewer
☆28Updated 3 months ago
Related projects ⓘ
Alternatives and complementary repositories for phylo-io
- Malleable All-seeing Journal Of Research Artifacts☆36Updated last year
- NCBI taxonomic identifier (taxid) changelog, including taxids deletion, new adding, merge, reuse, and rank/name changes.☆27Updated this week
- Workflows I find helpful for fungal genome annotation☆20Updated last year
- An approximate sequence pattern matcher for FASTQ/FASTA files.☆30Updated 8 years ago
- A toolkit for annotation of transposable element families from unassembled sequence reads☆31Updated last year
- Convert genbank files to a swath of other formats☆14Updated last year
- ☆13Updated 5 years ago
- http://www.combio.pl/alfree☆22Updated 2 years ago
- Find Unique genomic Regions☆29Updated this week
- ☆25Updated last year
- A method of assessing sequence complexity based on kmer frequencies☆28Updated 6 years ago
- SV detection from paired end reads mapping☆38Updated 14 years ago
- NovoGraph: building whole genome graphs from long-read-based de novo assemblies☆45Updated 3 years ago
- ☆27Updated 4 years ago
- Utility program for extracting sequences from a fasta/fastq file☆36Updated 8 months ago
- Parse GFF3 into Pandas dataframes☆26Updated 9 months ago
- A Perl extension and collection of utilities for Next-Generation Sequencing (NGS) data analysis☆23Updated 5 years ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆38Updated last year
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation☆25Updated 8 months ago
- ☆20Updated this week
- Time-resolved metagenomic sequencing of Lenski's long-term evolution experiment with Escherichia coli☆23Updated 5 years ago
- Automated optimisation of de-novo transcriptome assembly☆25Updated 9 years ago
- Python bindings for the TaxonKit library☆31Updated 3 months ago
- Bacterial Annotation by Learned Representation of Genes☆54Updated 3 years ago
- Testing building mulled containers for multi-requirement tools.☆69Updated this week
- Protein Alignment and Detection Interface☆61Updated 7 months ago
- Detection of incorrectly labeled sequences across kingdoms☆80Updated 2 years ago
- Visualize whole genome alignments as linear maps☆70Updated last month
- REINDEER REad Index for abuNDancE quERy☆57Updated 3 months ago
- Fast and accurate sequence demultiplexing☆27Updated 3 months ago