Alternatives and similar repositories for canto

Users that are interested in canto are comparing it to the libraries listed below

• pubseq / bh20-seq-resource
  Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis
  ☆13Updated 2 years ago
• krishnanlab / txt2onto
  Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.
  ☆25Updated 11 months ago
• AbbVie-ComputationalGenomics / genetic-evidence-approval
  ☆24Updated 4 years ago
• OHMI-ontology / OHMI
  OHMI: The Ontology of Host-Microbiome Interactions
  ☆12Updated 3 years ago
• smangul1 / good.software
  This is the GitHub repository for our recent study "A comprehensive analysis of the usability and archival stability of omics computation…
  ☆21Updated 2 years ago
• elixir-europe / BioHackathon
  Repository with information about the BioHackathon hosted in Paris in Nov 2018
  ☆28Updated 4 years ago
• biocompute-objects / BCO_Documentation
  Repository for documentation to support the IEEE 2791-2020 standard. Please see our home page for communications/publications:
  ☆17Updated last year
• jlanga / smsk
  Snakemake skeleton - Build workflows with Snakemake
  ☆19Updated last year
• SamStudio8 / majora2
  Malleable All-seeing Journal Of Research Artifacts
  ☆36Updated 2 years ago
• OBF / obf-docs
  Official documents of the Open Bioinformatics Foundation
  ☆41Updated 3 weeks ago
• biojs / biojs2galaxy
  A fast tool to convert BioJS components into Galaxy visualization plugins.
  ☆14Updated 5 years ago
• arpcard / aro
  The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of …
  ☆20Updated last month
• JCVenterInstitute / PanGenomePipeline
  PanGenomePipeline
  ☆16Updated last year
• quadram-institute-bioscience / albatradis
  Comparative TraDIS analysis
  ☆9Updated 2 years ago
• dcjones / isolator
  Rapid and robust analysis of RNA-Seq experiments.
  ☆32Updated 9 years ago
• opengenomebrowser / opengenomebrowser
  ☆16Updated last year
• elixir-europe / BioHackathon-projects-2019
  This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…
  ☆23Updated 4 years ago
• intermine / InterMineR
  R package for InterMine
  ☆18Updated 3 years ago
• blahah / assemblotron
  Automated optimisation of de-novo transcriptome assembly
  ☆25Updated 9 years ago
• LinkageIO / Camoco
  Camoco is a fully-fledged software package for building co-expression networks and analyzing the overlap interactions among genes.
  ☆43Updated 2 years ago
• cancerit / cgpBigWig
  BigWig manpulation tools using libBigWig and htslib
  ☆29Updated last year
• apallavicini / PLANiTS
  PLANiTS: a curated sequence reference dataset for plant ITS DNA metabarcoding
  ☆11Updated 4 years ago
• evoldoers / wtfgenes
  What's The Function of these genes?
  ☆22Updated 8 years ago
• DeveauP / QuantumClone
  Clonal reconstruction from HTS data
  ☆10Updated 3 years ago
• NCI-GDC / gdc-dnaseq-cwl
  CWL for GDC DNASeq workflows
  ☆22Updated last week
• research-software-ecosystem / content
  A metadata commons to store research software metadata
  ☆41Updated last week
• salmonteam / SalmonBlogResponse
  Response to blog post about Salmon
  ☆37Updated 7 years ago
• pachterlab / bears_analyses
  Examples of kallisto + sleuth
  ☆11Updated 8 years ago
• nextflow-io / nf-hack18
  Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/
  ☆18Updated 6 years ago
• Biochemistry1-FFM / uORF-Tools
  uORF-Tools are a workflow and a collection of tools for the analysis of 'Upstream Open Reading Frames' (short uORFs)
  ☆13Updated 6 years ago