Alternatives and similar repositories for multiomics-open-research:

Users that are interested in multiomics-open-research are comparing it to the libraries listed below

• epigen / KPNN
  Knowledge-primed neural networks
  ☆35Updated 2 years ago
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆52Updated 8 months ago
• jiang-q19 / scPRAM
  scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism
  ☆13Updated 5 months ago
• MaayanLab / archs4py
  Python package to load and query ARCHS4 data
  ☆19Updated 2 weeks ago
• yjgeno / GenKI
  ☆14Updated 11 months ago
• suinleelab / contrastiveVI
  ☆53Updated 11 months ago
• carpenter-singh-lab / 2022_Haghighi_NatureMethods
  High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations
  ☆48Updated 2 months ago
• altoslabs / perturbench
  ☆23Updated 2 months ago
• sidhomj / DeepTCR_Cancer
  Deep learning reveals predictive sequence concepts within immune repertoires to immunotherapy
  ☆16Updated 2 years ago
• lanagarmire / Asgard
  ☆41Updated last year
• theislab / scTab
  ☆57Updated 6 months ago
• rahuldhodapkar / cell2sentence
  Create cell sentences from sequencing data
  ☆22Updated 7 months ago
• chenhcs / FRoGS
  Functional Embedding of Gene Signatures
  ☆40Updated last year
• Lifoof / MoGCN
  Multi-omics integration method using AE and GCN
  ☆34Updated last year
• suinleelab / deepprofile-study
  Code for paper "A deep profile of gene expression across 18 human cancers"
  ☆20Updated 3 months ago
• snap-stanford / KGWAS
  KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph
  ☆56Updated 3 weeks ago
• ruppinlab / PERCEPTION
  Utilizing single-cell omics from patients tumor to predict response and resistance.
  ☆63Updated last year
• romain-lopez / DestVI-reproducibility
  Reproducing the experiments of the DestVI paper
  ☆18Updated 3 years ago
• HakimBenkirane / CustOmics
  A deep-learning framework for multi-omics integration
  ☆25Updated last year
• cole-trapnell-lab / sci-plex
  repository containing analysis scripts and auxiliary files
  ☆33Updated 4 years ago
• TencentAILabHealthcare / scPROTEIN
  ☆50Updated 3 months ago
• bowang-lab / IntegrAO
  Integrate Any Omics: Towards genome-wide data integration for patient stratification
  ☆44Updated last week
• epigen / CellWhisperer
  CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets
  ☆52Updated 5 months ago
• lulab / Pathformer
  Pathformer: biological pathway informed transformer model
  ☆27Updated last year
• EperLuo / scDiffusion
  A model developed for the generation of scRNA-seq data
  ☆53Updated last month
• bowang-lab / genomic-FM
  ☆22Updated 2 months ago
• Roy-lab / scMTNI
  ☆25Updated 2 months ago
• ArcInstitute / SRAgent
  LLM agents for working with the SRA and associated bioinformatics databases.
  ☆48Updated last week
• BaiDing1234 / AttentionPert
  ☆14Updated 8 months ago
• SuperBianC / scMulan
  Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.
  ☆57Updated 9 months ago