Linwei-Wu / Global-bacterial-diversity-in-WWTPsLinks
☆23Updated 6 years ago
Alternatives and similar repositories for Global-bacterial-diversity-in-WWTPs
Users that are interested in Global-bacterial-diversity-in-WWTPs are comparing it to the libraries listed below
Sorting:
- Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"☆50Updated 4 years ago
- R scripts for performing co-occurrence analyses☆35Updated 10 years ago
- This is a collection of scripts for analyzing mixed 16S/18S amplicon sequences using tools such as qiime2, DADA2, deblur, and bbtools☆36Updated 4 months ago
- ☆53Updated 5 years ago
- Code for running analyses carried out in Stegen et al. 2013, ISME☆30Updated 7 years ago
- dada2 formatted nifH database☆13Updated last year
- ☆79Updated 2 years ago
- Statistics and visualization for amplicon data☆72Updated 2 years ago
- ☆13Updated 4 years ago
- ☆13Updated last year
- Reproducible Analyses accompanying DADA2 + PacBio Manuscript☆33Updated 5 years ago
- Dissimilarity Overlap Curve analysis☆11Updated 3 years ago
- Repo for a Microbiome Protocol☆10Updated 7 years ago
- Various functions for analysis of microbial community data☆47Updated 2 months ago
- DiTing: A pipeline to infer and compare biogeochemical pathways in metagenomic data☆49Updated last year
- Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)☆91Updated 2 months ago
- This is the source code for multisamples ARGs profiling using SARG2.0 database☆46Updated 4 years ago
- Integrated Network Analysis Pipeline☆18Updated last year
- SourceTracker2☆82Updated last year
- Transform files to the microtable object with microeco package☆28Updated last month
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆32Updated 3 years ago
- Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)☆31Updated 6 years ago
- r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)☆72Updated 2 years ago
- Microbial co-occurrence network inferred from Earth Microbiome Project☆26Updated 5 years ago
- ☆39Updated 9 months ago
- ☆28Updated last year
- The Microbiome Explorer provides methods to analyze and visualize microbial community sequencing data either from the R command line or t…☆72Updated 3 years ago
- Horizontal gene transfer (HGT) identification pipeline☆65Updated 2 years ago
- MetaCompare☆19Updated last year
- An R package for removing contamination from metabarcoding (e.g., microbiome) datasets post-sequencing☆20Updated 2 years ago