Alternatives and similar repositories for Stochastic-assembly-of-river-microeukaryotes

Users that are interested in Stochastic-assembly-of-river-microeukaryotes are comparing it to the libraries listed below

• yedeng-lab / iNAP
  Integrated Network Analysis Pipeline
  ☆18Updated 11 months ago
• DaliangNing / iCAMP1
  Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)
  ☆89Updated 2 months ago
• taowenmicro / ggClusterNet
  Microbial ecological network visualization clustering
  ☆133Updated 2 weeks ago
• Mengting-Maggie-Yuan / warming-network-complexity-stability
  Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"
  ☆50Updated 4 years ago
• microbiota / amplicon
  Statistics and visualization for amplicon data
  ☆72Updated 2 years ago
• TongZhou2017 / itol.toolkit
  Helper Functions for Interactive Tree Of Life (iTOL)
  ☆179Updated last month
• mgoeker / table2itol
  Generating iToL annotations from Spreadsheet or CSV files
  ☆107Updated 5 years ago
• biofuture / Ublastx_stageone
  This is the source code for multisamples ARGs profiling using SARG2.0 database
  ☆46Updated 4 years ago
• qichao1984 / NCyc
  ☆51Updated 4 years ago
• emblab-westlake / MbioAssy
  ☆16Updated 5 months ago
• cafferychen777 / ggpicrust2
  Make Picrust2 Output Analysis and Visualization Easier
  ☆170Updated last month
• xinehc / args_oap
  ARGs-OAP: Online Analysis Pipeline for Antibiotic Resistance Genes Detection from Metagenomic Data Using an Integrated Structured ARG Dat…
  ☆66Updated 8 months ago
• UMNFuN / FUNGuild
  FUNGuild: parsing OTUs into functional guilds
  ☆123Updated last year
• xuechunxu / DiTing
  DiTing: A pipeline to infer and compare biogeochemical pathways in metagenomic data
  ☆48Updated last year
• stegen / Stegen_etal_ISME_2013
  Code for running analyses carried out in Stegen et al. 2013, ISME
  ☆30Updated 7 years ago
• YongxinLiu / Zhang2018SCLS
  Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)
  ☆31Updated 6 years ago
• YongxinLiu / Amplicon2017
  Data and scripts for amplicon pipeline
  ☆26Updated 6 years ago
• ChengGaoBerkeley / EPICON.Mycobiome
  ☆13Updated 4 years ago
• cozygene / FEAST
  Fast expectation maximization for microbial source tracking
  ☆135Updated last year
• SegataLab / lefse
  ☆86Updated last year
• taowenmicro / EasyStat
  EasyStat
  ☆19Updated 4 months ago
• YongxinLiu / Metagenome
  Metagenome analysis pipeline
  ☆99Updated 4 years ago
• taowenmicro / phyloseq_translate
  phyloseq R
  ☆12Updated 6 years ago
• YongxinLiu / EasyMicrobiome
  ☆133Updated 2 weeks ago
• SegataLab / export2graphlan
  Conversion software tool for producing both annotation and tree files for GraPhlAn
  ☆11Updated 3 years ago
• caporaso-lab / sourcetracker2
  SourceTracker2
  ☆81Updated last year
• Linwei-Wu / Global-bacterial-diversity-in-WWTPs
  ☆23Updated 6 years ago
• scwatts / fastspar
  Rapid and scalable correlation estimation for compositional data
  ☆95Updated last year
• taowenmicro / EasyMultiOmics
  EasyMultiOmics: An R package for comprehensive multi-omics data mining in systematic microbiome research
  ☆97Updated this week
• ParkinsonLab / Metatranscriptome-Workshop
  Metatranscriptomics Tutorial
  ☆66Updated 2 years ago