YongxinLiu / Amplicon2017Links
Data and scripts for amplicon pipeline
☆26Updated 6 years ago
Alternatives and similar repositories for Amplicon2017
Users that are interested in Amplicon2017 are comparing it to the libraries listed below
Sorting:
- Microbial ecological network visualization clustering☆126Updated 6 months ago
- Statistics and visualization for amplicon data☆71Updated 2 years ago
- Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"☆50Updated 3 years ago
- ☆126Updated 3 years ago
- Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)☆32Updated 6 years ago
- phyloseq R☆12Updated 6 years ago
- EasyStat☆19Updated last month
- Make Picrust2 Output Analysis and Visualization Easier☆156Updated this week
- ☆13Updated 4 years ago
- Helper Functions for Interactive Tree Of Life (iTOL)☆173Updated this week
- Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)☆86Updated 7 months ago
- Metagenome analysis pipeline☆99Updated 4 years ago
- R package for microbiome biomarker discovery☆189Updated 7 months ago
- ☆14Updated 6 years ago
- ☆84Updated last year
- A comprehensive R package for deep mining microbiome☆190Updated 2 months ago
- FUNGuild: parsing OTUs into functional guilds☆120Updated last year
- An R package for data analysis in microbial community ecology☆244Updated this week
- ☆15Updated 2 months ago
- Microbiome Protocol eBook related documents and scripts.☆49Updated 4 years ago
- Fast expectation maximization for microbial source tracking☆129Updated last year
- Repo for a Microbiome Protocol☆10Updated 7 years ago
- ☆120Updated last month
- Scripts for stat and plot figures in rice microbiome paper☆31Updated 11 months ago
- This is an R package for element cycle analysis using metagenomic data.☆37Updated 2 months ago
- Network construction, analysis, and comparison for microbial compositional data☆170Updated 5 months ago
- R scripts for performing co-occurrence analyses☆34Updated 10 years ago
- A companion R package for the MicrobiomeAnalyst web server☆126Updated 2 months ago
- Generating iToL annotations from Spreadsheet or CSV files☆104Updated 5 years ago
- Scripts for stat and plot figures in rice microbiome paper☆19Updated 6 years ago