Alternatives and similar repositories for Script-in-PopGenetics

Users that are interested in Script-in-PopGenetics are comparing it to the libraries listed below

• flystar233 / pyscript-bio
  生物信息学python代码，专注于重测序文本计算、处理
  ☆30Updated 6 months ago
• ShawnWx2019 / emmax-pipeline
  GWAS analysis process based on EMMAX software
  ☆16Updated 2 years ago
• schmitzlab / Widespread-Long-range-Cis-Regulatory-Elements-in-the-Maize-Genome
  scripts used for processing and analyzing data in the article.
  ☆13Updated 6 years ago
• galikbence / genome_annotation
  Pipeline for eukaryotic genome annotation based on external evidences
  ☆13Updated 2 years ago
• chaimol / bio_code
  this project is content about my bioinformation analysis code .it may have R，Shell，Python.
  ☆20Updated 2 years ago
• Chenghong412 / sheep_introgression
  ☆11Updated 3 years ago
• ZhijunBioinf / Teaching_GenomicLab
  基因组学实验
  ☆14Updated 3 years ago
• eacooper400 / GWAS_Pipelines
  Instructions and helpful R code for Running GEMMA and GAPIT
  ☆13Updated 8 years ago
• fengcong3 / HAPPE
  A tool to visualize the haplotype pattern and various information in excel.
  ☆21Updated 9 months ago
• shuliliu / cattleGTEx
  The cattle Genotype-Tissue Expression atlas v1
  ☆28Updated 2 years ago
• ZhaoTingzju / GWAS_script
  Working on cotton resequencing
  ☆11Updated 5 years ago
• pablobio / GALLO
  Genomic Annotation in Livestock for positional candidate LOci
  ☆13Updated 4 years ago
• YinYuan-001 / muntjac_code
  ☆10Updated 4 years ago
• melop / killigenomics
  Killifish genomics scripts
  ☆12Updated 4 years ago
• zhilizheng / qsubshcom
  qsub command for serveral cluster engine
  ☆14Updated 11 months ago
• yukaiquan / biotools
  I often use some of the self-written programs.
  ☆16Updated last month
• evodify / genotype-files-manipulations
  Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.
  ☆10Updated 4 years ago
• Rowena-h / FusariumLifestyles
  Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣
  ☆11Updated 2 years ago
• roberta-davidson / ADMIXTURE-smartPCA-PLINK-and-EIGENSOFT
  Scripts and notes on how to analyse ancient DNA genotype data to understand population structure
  ☆41Updated 2 years ago
• johanzi / gwas_gemma
  Perform GWAS with gemma in a simple pipeline
  ☆27Updated 7 months ago
• Shuhua-Group / CPC-graph-based-NGS-pipeline
  A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data
  ☆16Updated 3 months ago
• yingjiexiao / maizeG2P
  ☆12Updated 4 years ago
• Crazzy-Rabbit / Genome-analysis
  一些关于基因组及转录组的知识
  ☆37Updated last year
• Crazzy-Rabbit / Rscript-to-anaylise-and-visualize
  一些用于画图的R脚本
  ☆20Updated 6 months ago
• hhwagner1 / LandGenCourse_book
  ☆13Updated last year
• xinkaitong / 1k-pig-genomes
  Accurate haplotype construction and detection of selection signatures enabled by 889 high quality pig genome sequences
  ☆13Updated 2 years ago
• chaoning / GMAT
  ☆35Updated 3 years ago
• xuzhougeng / wgap
  Whole Genome Annotation Pipeline
  ☆16Updated 5 months ago
• songtaogui / pan-Zea_utilities
  the miscellaneous analysis scripts used in the research of pan-Zea genome and genetics
  ☆17Updated 3 years ago
• caasivfbioinfo / Bol_pangenome
  ☆16Updated 2 years ago