CandiceChuDVM / RNA-SeqLinks
New user
☆42Updated 4 years ago
Alternatives and similar repositories for RNA-Seq
Users that are interested in RNA-Seq are comparing it to the libraries listed below
Sorting:
- RNA-Seq analysis workflow☆104Updated 4 years ago
- Learning the Variant Call Format☆144Updated 3 weeks ago
- Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).☆93Updated 8 years ago
- RNA-seq workflow: exploratory analysis and differential expression☆78Updated last year
- csf fork of fastqc for usage on selected reads of unaligned bam file☆48Updated 12 years ago
- an R/shiny application for creation of Circos plot interactively☆158Updated 2 years ago
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆165Updated 8 months ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆117Updated 6 months ago
- ☆72Updated 3 years ago
- NGS-pipe: next-generation sequencing pipelines for precision oncology☆114Updated 6 years ago
- deconstructSigs☆143Updated 2 years ago
- A factor analysis package☆100Updated 13 years ago
- microRNA profiling pipeline☆79Updated 3 years ago
- a snakemake pipeline to process ChIP-seq files from GEO or in-house☆110Updated 5 years ago
- Genomic Interactive Visualization Engine☆145Updated 2 years ago
- Copy number vaiation detection from SNP arrays☆94Updated last year
- dN/dS methods to quantify selection in cancer and somatic evolution☆223Updated 3 months ago
- ☆50Updated 4 years ago
- Learning the Sequence Alignment/Map format☆114Updated 3 weeks ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- GWAS Pipeline for H3Africa☆111Updated 3 months ago
- ☆89Updated 4 years ago
- A short tutorial on how to use RSEM☆138Updated 5 years ago
- Scripts and data for Plotting in R for Biologists, a video course on YouTube☆61Updated 4 years ago
- A combined strategy to identify circular RNAs (circRNAs and ciRNAs) (Zhang et al., Complementary Sequence-Mediated Exon Circularization, …☆61Updated 6 years ago
- Materials for Spring 2018 Applied Genomics Course☆79Updated 6 years ago
- Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.☆149Updated 2 years ago
- A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.☆68Updated 3 weeks ago
- Statistical Analysis of RNA-Seq Tools☆106Updated 5 months ago
- Finder of Somatic Fusion Genes in RNA-seq data☆146Updated 2 years ago