RNA-seq data analysis practical
☆62Sep 9, 2014Updated 11 years ago
Alternatives and similar repositories for TeachingMaterial
Users that are interested in TeachingMaterial are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- shared scripts in Lu Lab @ Tsinghua University☆14Nov 7, 2018Updated 7 years ago
- Bioinformatics projects and code shared by Zhi John Lu☆10Jun 3, 2021Updated 5 years ago
- Differential gene expression analysis on RNA-seq data☆13Apr 26, 2024Updated 2 years ago
- This is the repository which contains the code that was used to generate the results and figures of the “Single-cell RNA-sequencing revea…☆13Apr 14, 2026Updated 3 months ago
- An alignment and analysis pipeline for Ribosome Profiling and RNA-seq data☆13Jul 2, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆12May 24, 2022Updated 4 years ago
- a tool for identifying circular RNAs using RNA-Seq data☆12Aug 10, 2015Updated 11 years ago
- Comparing and combining multiple metagenomic datasets☆16Oct 12, 2022Updated 3 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- The code for Daugherty, et al 2017 - Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans☆11Aug 24, 2017Updated 8 years ago
- ☆10Jun 21, 2015Updated 11 years ago
- Analysis of single cell RNA-seq data from innate lympoid cells☆15Aug 8, 2017Updated 9 years ago
- A set of R functions that help faciliate a lot of tedious processing☆19Aug 31, 2018Updated 7 years ago
- Analysis of single cell RNA-Seq data from Veres et al.☆14Dec 10, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆12Jul 6, 2023Updated 3 years ago
- A pipeline for the computational evaluation of RNA-Seq data☆40Sep 10, 2024Updated last year
- Best practice RNA-Seq analysis pipeline for reference-based RNA-Seq analysis☆41May 17, 2021Updated 5 years ago
- Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline☆27Oct 5, 2015Updated 10 years ago
- A repository for my solutions to problems from - http://www.rosalind.info☆23May 1, 2021Updated 5 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- Interface to 10x Genomics' 1.3 m single cell data set☆19Aug 2, 2018Updated 8 years ago
- RNA-seq analysis☆28Oct 30, 2021Updated 4 years ago
- ChromDiff program as described in Yen and Kellis, Nature Communications 2015.☆14May 12, 2016Updated 10 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A graduate-level elective course: Python Programming for Life Science Students☆10Mar 26, 2026Updated 4 months ago
- Simulator for structural variants in various types of next-generation sequencing data☆11Mar 21, 2017Updated 9 years ago
- ☆10Feb 25, 2024Updated 2 years ago
- Lu Lab @ Tsinghua University☆19Nov 11, 2025Updated 9 months ago
- Python package for writing flow cytometry standard (.fcs) files☆11Nov 9, 2025Updated 9 months ago
- The cattle Genotype-Tissue Expression atlas v1☆30Mar 14, 2023Updated 3 years ago
- Repository☆10Oct 23, 2024Updated last year
- Known and Novel IsoForm Explorer. Statistically based splicing detection for circular and linear isoforms☆33Jul 14, 2017Updated 9 years ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆24Jul 29, 2025Updated last year
- PARE: a computational method to Predict Active Regulatory Elements☆11Aug 8, 2025Updated last year
- Pipeline for lncRNA, Circular RNA, and novel mRNA identification.☆11May 5, 2023Updated 3 years ago
- Scripts for data and figure generation in SAVER paper☆18Jan 5, 2021Updated 5 years ago
- Portable database of microhaplotype marker and allele frequency data☆13Oct 2, 2025Updated 10 months ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Jun 18, 2026Updated last month
- Unsorted scripts for bioinformatics☆64Jul 1, 2021Updated 5 years ago