mgonzalezporta / TeachingMaterial
RNA-seq data analysis practical
☆59Updated 10 years ago
Related projects: ⓘ
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 3 years ago
- Analysis pipeline for ATAC-seq Data☆58Updated 3 years ago
- A combined strategy to identify circular RNAs (circRNAs and ciRNAs) (Zhang et al., Complementary Sequence-Mediated Exon Circularization, …☆60Updated 5 years ago
- Bioinformatics Workflows☆20Updated 3 years ago
- a snakemake pipeline to process ChIP-seq files from GEO or in-house☆101Updated 4 years ago
- Pipeline for processing inDrops sequencing data☆73Updated 5 years ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆46Updated 4 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆53Updated 4 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆98Updated last month
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆61Updated 3 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆42Updated 4 years ago
- ☆87Updated 3 years ago
- Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).☆89Updated 7 years ago
- New user☆41Updated 3 years ago
- nucleosome calling using ATAC-seq☆105Updated 3 years ago
- Scripts for next generation sequencing☆47Updated 4 years ago
- ☆47Updated 3 years ago
- Tutorial for AMSI BioInfoSummer 2018☆28Updated 5 years ago
- RNA-Seq analysis workflow☆103Updated 3 years ago
- ENCODE Uniform processing pipeline for ChIP-seq☆120Updated 4 years ago
- STAR based ENCODE Long RNA-Seq processing pipeline☆92Updated 3 years ago
- release version☆46Updated 2 years ago
- Bioconductor workshop: Analysis of single-cell RNA-seq data with R and Bioconductor☆73Updated 7 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆35Updated 6 years ago
- ☆115Updated last year
- RNA-seq Quantification of Alternative Polyadenylation☆41Updated last year
- DNA methylation analysis notes from Ming Tang☆78Updated 5 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆73Updated 2 years ago
- ☆69Updated 4 months ago
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆74Updated last year