A combined strategy to identify circular RNAs (circRNAs and ciRNAs) (Zhang et al., Complementary Sequence-Mediated Exon Circularization, Cell (2014), 159:134-147)
☆62Jun 1, 2019Updated 7 years ago
Alternatives and similar repositories for CIRCexplorer
Users that are interested in CIRCexplorer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a tool for identifying circular RNAs using RNA-Seq data☆12Aug 10, 2015Updated 10 years ago
- tools to find circRNAs in RNA-seq data☆47Nov 16, 2017Updated 8 years ago
- Pipeline for finding circular RNAs from RNA-seq data, based on STAR. Used in (Westholm et al, Cell Reports, 2014).☆17Jan 17, 2023Updated 3 years ago
- circular RNA analysis toolset☆90Sep 8, 2024Updated last year
- DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies …☆38Aug 4, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Known and Novel IsoForm Explorer. Statistically based splicing detection for circular and linear isoforms☆33Jul 14, 2017Updated 9 years ago
- Find circRNAs in RNA-seq data.☆15Jul 5, 2016Updated 10 years ago
- CircRNA testing and ploting R package☆10Nov 23, 2020Updated 5 years ago
- Easily draw publication-quality figures of splicing quantitative trait loci☆16Feb 2, 2018Updated 8 years ago
- isoCirc☆10Nov 27, 2023Updated 2 years ago
- CircSplice☆11Feb 27, 2019Updated 7 years ago
- Analysis pipeline for our circSC manuscript☆14May 18, 2022Updated 4 years ago
- circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line dri…☆30Dec 19, 2023Updated 2 years ago
- Detection of Circular RNA and Fusions from RNA-Seq☆32Aug 14, 2018Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- An R package for annotation of circular RNAs☆11Mar 30, 2020Updated 6 years ago
- An integrated web-based resource for mapping functional networks of long or circular forms of non-coding RNAs☆11Jul 13, 2019Updated 7 years ago
- a tool to detect differentially expressed circular RNA☆13Nov 12, 2025Updated 8 months ago
- rnalib: a python-based transcriptomics library☆13Jan 23, 2026Updated 5 months ago
- ☆20Jun 8, 2023Updated 3 years ago
- common useful script☆34Jun 30, 2026Updated 2 weeks ago
- Validation of sycnmers compared to minimizers☆11May 10, 2025Updated last year
- A bioinformatics tool for SV detection and virus integration discovery☆21Sep 12, 2017Updated 8 years ago
- ☆25May 16, 2020Updated 6 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Specific Transposable Element Aligner (HERV-K)