MuRaL is a deep learning framework for building base-resolution mutation rate maps.
☆21Nov 20, 2025Updated 5 months ago
Alternatives and similar repositories for MuRaL
Users that are interested in MuRaL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Detection and classification selective sweep use domain adaptive model☆10Apr 29, 2024Updated 2 years ago
- The official implementation for "SANGO".☆11Mar 17, 2024Updated 2 years ago
- An R package to process and analyze transcriptomic data☆19Jun 18, 2025Updated 10 months ago
- 🏔 coverage extraction from BAM/CRAM files, supporting targets 📊☆66Mar 20, 2026Updated last month
- Reducing reference bias using multiple population reference genomes☆34May 27, 2024Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- use the noise☆15Apr 15, 2020Updated 6 years ago
- HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.☆11Sep 24, 2024Updated last year
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated 2 years ago
- ☆10Aug 21, 2025Updated 8 months ago
- ☆15Sep 13, 2024Updated last year
- A small program that glues together other programs allowing a user to input a codon alignment in FASTA format and produce an annotated ph…☆18Jan 14, 2015Updated 11 years ago
- DECIPHER for learning high-fidelity disentangled embeddings from spatial omics data☆24Jan 20, 2026Updated 3 months ago
- ☆17Jul 19, 2024Updated last year
- R tools for analysis and visualization of single-cell subclustering data☆18Sep 9, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Spatiotemporal single-cell RNA sequencing of developing hearts reveals interplay between cellular differentiation and morphogenesis☆13Oct 31, 2023Updated 2 years ago
- scAB detects multiresolution cell states with clinical significance☆22Nov 14, 2022Updated 3 years ago
- ☆11Dec 7, 2022Updated 3 years ago
- A toolkit for analyzing architectural stripes☆20Dec 1, 2024Updated last year
- CADD-SV – a framework to score the effect of structural variants☆18Feb 11, 2026Updated 2 months ago
- Companion repository for the human variant calling pipeline comparison paper☆12Feb 21, 2022Updated 4 years ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆20Mar 25, 2026Updated last month
- A tool for identifying Phenotype-Associated cell Subpopulations from single-cell sequencing data by integrating bulk data☆18Jan 16, 2026Updated 3 months ago
- single-cell Contamination Detection and Correction☆18Jan 15, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- DNA kmer operations for nim☆14Apr 24, 2022Updated 4 years ago
- PopSTR - A Population based microsatellite genotyper☆32Oct 23, 2023Updated 2 years ago
- Serve your genotypes and phenotypes via an API for satoshis☆22Dec 4, 2015Updated 10 years ago
- ☆14Oct 20, 2022Updated 3 years ago
- Pedigree drawing with ease☆24Feb 10, 2022Updated 4 years ago
- A tool set to assess the quality of the per read phasing and reduce the errors.☆13Jun 25, 2020Updated 5 years ago
- DeepMosaic is a deep-learning-based mosaic single nucleotide classification tool without the need of matched control information.☆53Dec 6, 2025Updated 4 months ago
- Calculates the Variant Allele Fraction of variants in VCF files☆19Nov 28, 2024Updated last year
- Graphite - Graph-based variant adjudication☆28Feb 9, 2021Updated 5 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Hotspot is a program for identifying genomic regions of local enrichment of short-read sequence tags.☆16Apr 12, 2014Updated 12 years ago
- ☆10Sep 27, 2022Updated 3 years ago
- Software to estimate oligonucleotide duplexes melting temperature. Includes state-of-the-art monovalent (e.g., Na+) and bivalent (Mg2+) i…☆12Sep 18, 2022Updated 3 years ago
- Polygenic score calculation from VCF in Nim.☆15Nov 22, 2020Updated 5 years ago
- CHISEL -- Copy-number Haplotype Inference in Single-cell by Evolutionary Links☆43Nov 13, 2024Updated last year
- 🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…☆161Dec 25, 2025Updated 4 months ago
- Scripts for analyses and figures for SNP STR Imputation manuscript☆14Jul 24, 2018Updated 7 years ago