joonan-lab / cwas
Category-wide association study (CWAS) (Werling et al., 2018; An et al., 2018)
☆10Updated 2 months ago
Alternatives and similar repositories for cwas
Users that are interested in cwas are comparing it to the libraries listed below
Sorting:
- ☆17Updated 2 months ago
- Estimate locus specific human LINE-1 expression.☆35Updated 2 years ago
- Data of genome annotation from full-stack ChromHMM model trained with 1032 datasets from 127 reference epigenomes☆35Updated 10 months ago
- Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent gen…☆29Updated 4 years ago
- Genome-wide assessment of differential translations with ribosome profiling data☆19Updated last week
- A toolkit for QC and visualization of ATAC-seq results.☆70Updated 4 months ago
- A portable, flexible, parallelized tool for complete processing of massively parallel reporter assay data☆32Updated 4 months ago
- splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq☆16Updated last month
- Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanop…☆73Updated 2 years ago
- Estimation of Promoter Activity from RNA-Seq data☆53Updated 3 years ago
- ENCODE long read RNA-seq pipeline☆47Updated 2 years ago
- nRex: Germline and somatic single-nucleotide, short indel and structural variant calling☆12Updated 3 weeks ago
- An analysis toolkit for single-cell methylation sequencing data☆18Updated this week
- ENCODE whole-genome bisulfite sequencing (WGBS) pipeline☆31Updated 3 years ago
- simplified cellranger for long-read data☆19Updated last month
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated last year
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.