joonan-lab / cwasLinks
Category-wide association study (CWAS) (Werling et al., 2018; An et al., 2018)
☆10Updated 5 months ago
Alternatives and similar repositories for cwas
Users that are interested in cwas are comparing it to the libraries listed below
Sorting:
- ☆18Updated 3 weeks ago
- Bioinformatics pipeline to identify differentially active transcription factors between conditions using expression and epigenetic data☆14Updated last year
- ☆10Updated 3 weeks ago
- nRex: Germline and somatic single-nucleotide, short indel and structural variant calling☆12Updated 3 months ago
- Junction centric alternative splicing translator☆20Updated 2 years ago
- A tiny cell atlas for commonly sequenced organisms.☆30Updated last year
- Synchronize the bioinformatics knowledge-sharing content in the WeChat public account to GitHub to facilitate everyone's systematic learn…☆3Updated 6 months ago
- The scripts used for the analyses in TOME project☆25Updated 8 months ago
- An R package for finding non-adenosine residues in poly(A) tails of ONT direct RNA sequencing reads☆9Updated 3 months ago
- The Zavolab Automated RNA-seq Pipeline☆35Updated 2 weeks ago
- The scripts used for analyzing JAX mouse dataset☆25Updated 9 months ago
- Estimate locus specific human LINE-1 expression.☆36Updated 2 years ago
- Data of genome annotation from full-stack ChromHMM model trained with 1032 datasets from 127 reference epigenomes☆37Updated last year
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆74Updated 2 years ago
- Single cell Nanopore sequencing data for Genotype and Phenotype☆54Updated 2 months ago
- Ultimate ATAC-seq Data Processing, Quantification and Annotation Snakemake Workflow and MrBiomics Module.☆59Updated this week
- Notes on ChIP-seq and other-seq-related tools☆26Updated 3 weeks ago
- Quantification of transposable element expression using RNA-seq☆73Updated last year
- A list of alternative splicing analysis resources☆45Updated 4 months ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- PathIntegrate Python package for pathway-based multi-omics data integration☆16Updated 8 months ago
- Estimation of Promoter Activity from RNA-Seq data☆53Updated 3 weeks ago
- A continually expanding collection of RNA-seq tools☆51Updated 9 months ago
- Circular RNA Identification for Nanopore Sequencing☆21Updated last year
- An analysis toolkit for single-cell methylation sequencing data☆21Updated this week
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆78Updated 3 years ago
- ☆41Updated 2 weeks ago
- Python implementation of HiCRep stratum-adjusted correlation coefficient of Hi-C data with Cooler sparse contact matrix support☆38Updated last year
- cfDNAPro specializes in standardized and robust cfDNA fragmentomic analysis☆34Updated last week
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year