A deep learning-based lncRNA subcellular localization predictor
☆16Aug 17, 2022Updated 3 years ago
Alternatives and similar repositories for DeepLncLoc
Users that are interested in DeepLncLoc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Feb 6, 2021Updated 5 years ago
- CLI to automate Nextflow pipeline testing☆12Dec 15, 2025Updated 5 months ago
- Predict the boundary of transcript start and end from RNA-seq reads alignment☆11Feb 13, 2017Updated 9 years ago
- lncHOME (lncRNA Homology Explorer), a computational pipeline that identifies a unique coPARSE-lncRNA class with conserved genomic locatio…☆12Nov 2, 2023Updated 2 years ago
- Predicting ncRNA-protein interaction using high-level features based on deep learning☆15May 2, 2020Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Multi-label subcellular localization and sorting signal prediction based on protein foundation models☆25Jan 12, 2026Updated 4 months ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆25May 30, 2023Updated 2 years ago
- Predicting protein subcellular localization using deep learning☆16Sep 13, 2019Updated 6 years ago
- Pipeline to call somatic cancer neoantigens from mutations in patient tumor DNA☆14Feb 16, 2023Updated 3 years ago
- a machine learning model to identify nucleotide features determining RNA subcellular localization☆13Mar 11, 2023Updated 3 years ago
- A library for counting small kmer frequencies in nucleotide sequences.☆27Oct 29, 2024Updated last year
- iLearn, a Python Toolkit and Web Server Integrating the Functionality of Feature Calculation, Extraction, Clustering, Feature Selection, …☆85Jul 20, 2022Updated 3 years ago
- ECML16: GaKCo: a Fast Gapped k-mer string Kernel using Counting☆14Aug 28, 2019Updated 6 years ago
- ☆18Aug 5, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Modelling RBP binding preferences to predict RPB binding sites☆11Aug 11, 2023Updated 2 years ago
- ☆13Oct 3, 2017Updated 8 years ago
- The repository contains all the code for the paper amino acid encoding using deep learning application☆20Jul 5, 2024Updated last year
- Use LSTM neural network for 1D distributional data prediction☆22Sep 29, 2022Updated 3 years ago
- a deep learning framework for essential protein prediction☆13Mar 24, 2023Updated 3 years ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆46Jul 24, 2024Updated last year
- A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design☆22Feb 11, 2025Updated last year
- MASIC generates selected ion chromatograms (SICs) for all of the parent ions chosen for fragmentation in an LC-MS/MS analysis, characteri…☆17Dec 4, 2025Updated 5 months ago
- Analysis and visualization of RNA-Seq results☆31May 1, 2026Updated 2 weeks ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Altered TCR Ligand Affinities and Structures☆12Dec 1, 2023Updated 2 years ago
- A pipeline to rapidly detect exogenous DNA integration sites using DNA or RNA paired-end sequencing data☆12Apr 25, 2023Updated 3 years ago
- Synthetic Accessible Prediction of Organic Compounds based on Graph Attention Mechanism☆22Sep 22, 2023Updated 2 years ago
- ☆11Sep 22, 2021Updated 4 years ago
- A deep learning framework for predicting lncRNA–disease associations☆10Dec 29, 2020Updated 5 years ago
- Create Regional Association Plots☆13Sep 7, 2025Updated 8 months ago
- ☆27May 22, 2025Updated 11 months ago
- DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis☆21Feb 5, 2021Updated 5 years ago
- Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.☆43Oct 23, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆13Aug 2, 2024Updated last year
- Easy to get started with molecular dynamics simulation.☆66Apr 18, 2026Updated last month
- Locate transgenic insertion sites☆11Mar 14, 2023Updated 3 years ago
- Automatic RNA-Seq Pipelines with Interactive Report☆25Jun 1, 2025Updated 11 months ago
- Detection and classification selective sweep use domain adaptive model☆10Apr 29, 2024Updated 2 years ago
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- Official source code for Time is Not Enough: Time-Frequency based Explanation for Time-Series Black-Box Models☆13Dec 5, 2024Updated last year