Alternatives and similar repositories for lncLocator2

Users that are interested in lncLocator2 are comparing it to the libraries listed below

• deepclip / deepclip
  This repository contains all DeepCLIP Python code
  ☆11Updated last year
• bioinformatics-sannio / ncrna-deep
  Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"
  ☆16Updated 4 years ago
• Center-for-Health-Data-Science / bulkDGD
  Code, documentation, and tutorials for the DGD model trained on bulk RNA-Seq data.
  ☆13Updated last year
• Sanofi-Public / RiboNN
  RiboNN: predicting translation efficiencies from mRNA sequences
  ☆50Updated last month
• goodarzilab / SwitchFinder
  ☆20Updated last year
• lhy0322 / BertSNR
  BertSNR: an interpretable deep learning framework for single nucleotide resolution identification of transcription factor binding sites b…
  ☆12Updated 8 months ago
• YeoLab / HydRA
  ☆11Updated last year
• CSUBioGroup / DeepLncLoc
  A deep learning-based lncRNA subcellular localization predictor
  ☆16Updated 3 years ago
• anfoss / PCprophet
  Framework for systematic discovery of novel complexes and differential analysis of cofractionation MS datasets
  ☆14Updated 2 months ago
• FunctionLab / tapioca
  a framework for predicting global protein-protein interaction networks from dynamic mass spec data
  ☆24Updated last year
• Pengeace / RPITER
  A hierarchical deep learning framework for ncRNA-protein interaction prediction.
  ☆14Updated 3 years ago
• mhorlacher / rbpnet
  ☆19Updated last year
• xypan1232 / IPMiner
  Predicting ncRNA-protein interaction using high-level features based on deep learning
  ☆15Updated 5 years ago
• ShenLab / gMVP
  ☆21Updated 3 years ago
• Zhaolab-GitHub / ZHMolGraph
  ☆14Updated last year
• fratajcz / speos
  A positive-unlabeled ensemble learning framework for disease gene prioritization.
  ☆20Updated 3 months ago
• dmaticzka / GraphProt
  GraphProt: modelling binding preferences of RNA-binding proteins
  ☆20Updated 7 years ago
• Weeks-UNC / RNAvigate
  Very flexible tools for plotting and analyzing all kinds of RNA structure data
  ☆15Updated this week
• BioComputingUP / MobiDB-lite
  Long disorder consensus predictor
  ☆18Updated 5 months ago
• Tsedao / MultiRM
  [Nat. Commun.] Code for paper 'Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely …
  ☆33Updated 4 years ago
• Pandaman-Ryan / AgentBind
  ☆14Updated last year
• TencentAILabHealthcare / DeepAIR
  ☆38Updated 2 years ago
• HarveyYan / RNATracker
  Prediction of mRNA subcellular localization using deep recurrent neural networks
  ☆15Updated 6 years ago
• allydunham / sequence_unet
  Fully convolutional deep learning variant effect predictor architecture
  ☆23Updated 2 years ago
• JinsenLi / deepDNAshape
  A method to predict DNA shape features considering farther flanking region.
  ☆38Updated last year
• kaitlin309 / PRIESSTESS
  ☆13Updated 5 months ago
• walterlab-HMS / SPOC
  Code repository for the SPOC tool for scoring binary AF-M predicitons.
  ☆15Updated 9 months ago
• dincarnato / draco
  Deconvolution of RNA Alternative COnformations
  ☆14Updated this week
• suinleelab / PAUSE
  Code for paper "Principled feature attribution for unsupervised gene expression analysis"
  ☆12Updated 2 years ago
• biomed-AI / scAdapt
  ☆10Updated 4 years ago