Benchmarking Pipeline for Prediction of Protein-Protein Interactions
☆14Feb 7, 2022Updated 4 years ago
Alternatives and similar repositories for B4PPI
Users that are interested in B4PPI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Ultra-fast in-silico structure mutation☆36Apr 9, 2025Updated 11 months ago
- ☆11Jan 2, 2021Updated 5 years ago
- ☆16Jul 13, 2022Updated 3 years ago
- ☆17Mar 26, 2024Updated 2 years ago
- Code to reproduce analysis of Milo manuscript☆15Aug 3, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- OPUS-TASS: A Protein Backbone Torsion Angles and Secondary Structure Predictor Based on Ensemble Neural Networks☆10Jul 9, 2020Updated 5 years ago
- A Python package for mapping sequence aligned data onto protein structures☆37May 26, 2021Updated 4 years ago
- (a) (p)erfect (c)ircle? ... tests DNA sequences for overlapping ends, then trims and rejoins, and aligns reads to test the join☆11Apr 29, 2021Updated 4 years ago
- PAgeRAnk-flux on Graphlet-guided network for multi-Omic data integratioN - Network Inference☆11Nov 12, 2024Updated last year
- A pipeline creation tool using Snakemake☆13Updated this week
- ProtT5 (Transformer) embeddings used for residue wise disorder prediction in proteins☆11Mar 11, 2024Updated 2 years ago
- Scripts used for the Differential NicheNet analyses in the Liver Atlas paper Guilliams et al., Cell 2022☆10Jan 12, 2022Updated 4 years ago
- ALD study data analysis☆13Feb 16, 2023Updated 3 years ago
- ☆34Nov 22, 2023Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Tool to parse fasterq/fastq dump outputs for SRA scRNAseq data☆18Mar 7, 2024Updated 2 years ago
- Ramirez Lab WIKI, where you could find Tutorials, Script Library, Gallery, FAQ, and a little bit more☆13Sep 11, 2024Updated last year
- Adds Discord-like syntax for inline spoilers.☆21Jan 2, 2026Updated 2 months ago
- ☆15Dec 13, 2020Updated 5 years ago
- Scientific Dataset Quality Control and Data Exploration Tool☆21Mar 21, 2026Updated last week
- Single cell STEM (scSTEM) is a shiny app based R package for visualizing and clustering genes in pseudotime ordered single cell RNA-seq d…☆21Jul 7, 2022Updated 3 years ago
- DeepAAI☆35Dec 25, 2024Updated last year
- E(3) equivariant graph neural network for PPI site prediction☆10Sep 18, 2023Updated 2 years ago
- Iterative masking algorithm on MSA Transformer to generate synthetic sequences☆29Jan 17, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- a collection of colabs useful for molecular biology☆32Feb 27, 2024Updated 2 years ago
- Nucmer from Mummer3 followed by ggplot for nicer and more customisable genome alignment plots.☆11Feb 25, 2021Updated 5 years ago
- Network annotation visualization☆18May 21, 2025Updated 10 months ago
- Antimicrobial Peptide Structural Evolution Miner (AMP-SEMiner), an integrated AI framework designed for the simultaneous identification o…☆14May 10, 2025Updated 10 months ago
- ☆35Jan 26, 2026Updated 2 months ago
- A command line tool for rapid visualisation of AlphaFold2 and AlphaFold3 predictions.☆14Oct 21, 2025Updated 5 months ago
- ☆12Jul 30, 2019Updated 6 years ago
- Python framework for Deep Learning in Proteomics☆40Mar 2, 2026Updated 3 weeks ago
- Analysis for 2019 submission "Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis" Schaffli…☆22Jun 17, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- snpless-nf - A Nextflow pipeline for time-course analysis with bacterial NGS whole-genome data.☆14May 12, 2024Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆81Oct 24, 2025Updated 5 months ago
- ☆10Jan 31, 2022Updated 4 years ago
- Scalable high-throughput short-read open reading frame prediction☆12Jan 13, 2017Updated 9 years ago
- RNA velocity validation☆22Mar 16, 2022Updated 4 years ago
- molecular plots in Jupyter, powererd by Blender Geometry Nodes☆55Mar 27, 2024Updated 2 years ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆21Feb 21, 2025Updated last year