Tools which deal with multiple single cell measurements
☆25May 28, 2026Updated 2 months ago
Alternatives and similar repositories for SingleCellMultiOmics
Users that are interested in SingleCellMultiOmics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cell type purification by single-cell transcriptome-trained sorting☆16Jul 8, 2019Updated 7 years ago
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆11Sep 20, 2022Updated 3 years ago
- Molecular interactions inference from single-cell multi-omics data☆31May 7, 2026Updated 3 months ago
- SingleCellNet: classify single cells across species and platforms☆142Aug 21, 2023Updated 2 years ago
- ☆12Sep 8, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- From QC to summary statistics☆17Jun 27, 2020Updated 6 years ago
- ☆39Apr 21, 2026Updated 3 months ago
- SingleCell: A Python/Cython Package for Processing Single-Cell RNA-Seq Data.☆11Jan 26, 2018Updated 8 years ago
- MGcount github repository☆14Jan 19, 2023Updated 3 years ago
- In-silico doublet annotation for single cell RNA sequencing data☆11Jan 7, 2026Updated 7 months ago
- Unsupervised cell functional annotation for single-cell RNA-Seq☆22Jan 11, 2023Updated 3 years ago
- scVI extension for unspliced RNA☆15May 18, 2025Updated last year
- ☆16May 23, 2022Updated 4 years ago
- A shiny app for metacell analysis☆11Jun 1, 2026Updated 2 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Cell Annotation using Machine Learning-based method for the presence of Unknown cells (CAMLU)☆13May 19, 2025Updated last year
- Implements several Markov chain Monte Carlo (MCMC) algorithms for the latent Dirichlet allocation (LDA) model☆11Feb 11, 2020Updated 6 years ago
- ☆12Oct 23, 2023Updated 2 years ago
- A Python library for the design and control of artificial swarms.☆13Sep 10, 2017Updated 8 years ago
- ☆12Dec 4, 2023Updated 2 years ago
- SHARP: Single-cell RNA-seq Hyper-fast and Accurate processing via ensemble Random Projection☆18Apr 26, 2021Updated 5 years ago
- ☆46Aug 13, 2024Updated last year
- Source code for iDeLUCS. An interactive deep-learning based tool for clustering of genomic sequences☆15Jul 18, 2024Updated 2 years ago
- SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data☆19Mar 27, 2021Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- R package for large-scale CNV analysis from RNA-seq☆20Dec 21, 2023Updated 2 years ago
- Neural Crest Fate Decisions☆11Jul 9, 2019Updated 7 years ago
- Immunogenetic Data Tools related to HLA, GLStrings, Linkage Disequilibrium☆11Jun 14, 2023Updated 3 years ago
- ☆15Feb 12, 2026Updated 5 months ago
- 🏔 coverage extraction from BAM/CRAM files, supporting targets 📊☆67Aug 3, 2026Updated last week
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Mar 29, 2023Updated 3 years ago
- coding exercise using TCGA immune infiltration data☆11Feb 2, 2024Updated 2 years ago
- Trends in single cell papers☆17Sep 23, 2024Updated last year
- ☆18Oct 22, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- TRAPPIST: Totally Rad Analysis Pipelines Python Informatics Super Tool (actually, a python-based genomics analysis toolbox)☆14Jan 25, 2018Updated 8 years ago
- ☆12Apr 13, 2020Updated 6 years ago
- VStrains is a de novo approach for reconstructing strains from viral quasispecies.☆24Feb 22, 2026Updated 5 months ago
- ☆20Oct 22, 2020Updated 5 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆36Apr 4, 2025Updated last year
- scPrisma is a spectral analysis method, for pseudotime reconstruction, informative genes inference, filtering, and enhancement of underly…☆21Mar 31, 2024Updated 2 years ago
- Python framework for single-cell RNA-seq clustering with special focus on transfer learning.☆19Aug 29, 2019Updated 6 years ago