methylR: a single shiny solution from sequencer data to pathway analysis
☆13Oct 30, 2024Updated last year
Alternatives and similar repositories for methylr
Users that are interested in methylr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Course homepages for some of the courses given at SciLifeLab☆21Jan 23, 2020Updated 6 years ago
- rnalib: a python-based transcriptomics library☆14Jul 27, 2026Updated 2 months ago
- A positive-unlabeled ensemble learning framework for disease gene prioritization.☆21Nov 10, 2025Updated 11 months ago
- ☆13May 27, 2025Updated last year
- ClusterScan, search for clusters of features in a given annotation.☆10Aug 26, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- GWAS genetics Fine-mapping method☆18Jul 27, 2026Updated 2 months ago
- Homologizer: phasing gene copies into polyploid subgenomes☆13Feb 3, 2026Updated 8 months ago
- A nextflow pipeline with a GMS touch for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbio…☆10Jan 23, 2026Updated 8 months ago
- Open-Source Software for Omic Data Analysis and Visualization☆43Feb 25, 2026Updated 7 months ago
- ☆23Apr 23, 2026Updated 5 months ago
- A Nextflow pipeline designed to classify, align and assemble nanopore metagenomic reads.☆18Mar 18, 2025Updated last year
- Molecular interactions inference from single-cell multi-omics data☆33May 7, 2026Updated 5 months ago
- ☆16May 7, 2023Updated 3 years ago
- ARGpore2☆13Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12Dec 17, 2025Updated 9 months ago
- Antibody-Specific Epitope Mapping☆19Sep 10, 2025Updated last year
- Package for adding some multivariate visualizations to ggplot2☆18Sep 7, 2025Updated last year
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆12May 31, 2024Updated 2 years ago
- ☆19May 5, 2020Updated 6 years ago
- i-ADHoRe is a highly sensitive software tool to detect degenerated homology relations within and between different genomes.☆18Jun 28, 2024Updated 2 years ago
- Jupyter notebooks - A tool to write and share executable notebooks and data visualization☆10Feb 5, 2026Updated 8 months ago
- ☆15Dec 8, 2023Updated 2 years ago
- DEvis: an R package for aggregation and visualization of differential expression data☆17Dec 9, 2020Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆32Mar 13, 2025Updated last year
- Reproducible Research in Finse☆10Aug 5, 2020Updated 6 years ago
- Genotyping Immunoglobulin Heavy Chain Variable Genes using Short Read Data☆13May 9, 2025Updated last year
- Website and slides for intro to bioinformatics class at Fred Hutch☆13Jun 4, 2018Updated 8 years ago
- R tool to analyse and integrate multiple -omics data☆16Sep 10, 2026Updated last month
- An automated workflow to create disease-specific Knowledge Graphs☆25Mar 24, 2026Updated 6 months ago
- GWAS genetics Fine-mapping method☆28Jun 11, 2026Updated 4 months ago
- Fast, efficient, lossless compression of fastq files☆14Jan 4, 2021Updated 5 years ago
- ☆24Apr 17, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Gene copy number prediction from k-mer frequencies☆18Apr 15, 2026Updated 6 months ago
- Display HTML Elements on Full Screen in 'Shiny' Apps Using 'Screenfull.js'☆33Apr 20, 2023Updated 3 years ago
- A pipeline for for large-scale analysis of antimicrobial resistance genes and their flanking regions in metagenomic datasets☆32Nov 9, 2025Updated 11 months ago
- Network-based module discovery algorithm with high rate of empirically-validated term calls☆14Oct 22, 2023Updated 2 years ago
- Repository☆10Oct 23, 2024Updated last year
- an R package for deep mining gene co-expression networks in multi-trait expression data☆26Jan 23, 2026Updated 8 months ago
- Data Integration tool utilizing network information for predictive analyses☆16May 15, 2025Updated last year