JD2112 / methylr
methylR: a single shiny solution from sequencer data to pathway analysis
☆11Updated 2 months ago
Alternatives and similar repositories for methylr:
Users that are interested in methylr are comparing it to the libraries listed below
- ☆27Updated 3 months ago
- 📊 An R package of RNA-seq workflow☆16Updated 2 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆36Updated 2 weeks ago
- Merge fastq files split over lanes☆20Updated 6 years ago
- interactive plots for differential expression analysis☆25Updated this week
- an R package for deep mining gene co-expression networks in multi-trait expression data☆18Updated 5 months ago
- Isoform-level functional RNA-Seq analysis 🧬☆22Updated last month
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆24Updated 10 months ago
- ☆21Updated 4 months ago
- ☆25Updated last year
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 2 years ago
- A set of tools to annotate VCF files with expression and readcount data☆26Updated 4 months ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆32Updated 2 years ago
- A command line tool to compute mapping statistics from a BAM file☆23Updated 2 years ago
- iread☆23Updated 3 years ago
- A shiny package for microbiome functional enrichment analysis☆37Updated 2 months ago
- ☆27Updated last year
- ☆15Updated 3 months ago
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆19Updated 7 years ago
- a set of NGS pipelines☆24Updated 3 weeks ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆22Updated this week
- ☆32Updated last year
- Documentation for vcfR☆10Updated 2 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 3 years ago
- RNA-seq data comprehensive data analysis toolbox☆19Updated 2 years ago
- ☆30Updated 4 years ago
- ☆23Updated 3 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆34Updated 6 months ago
- Time-Course Multi-Omics data integration☆24Updated 9 months ago
- R package wrapping bedtools☆38Updated 4 months ago