Interactive applications of stlearn
☆17May 1, 2023Updated 3 years ago
Alternatives and similar repositories for stlearn_interactive
Users that are interested in stlearn_interactive are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Feb 28, 2022Updated 4 years ago
- Study of Multiple Sclerosis(MS) using paried snRNA-seq and Visium transcriptmics datasets.☆11Dec 11, 2024Updated last year
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated 6 months ago
- Multi-resolution Variational Inference☆10Oct 9, 2024Updated 2 years ago
- A novel machine learning pipeline to analyse spatial transcriptomics data☆262Updated this week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆13Feb 15, 2024Updated 2 years ago
- ☆10Jan 17, 2023Updated 3 years ago
- Single-cell Graph Cuts Optimization☆17Apr 27, 2024Updated 2 years ago
- Analysis of TrackMate XML outputs in R☆17Sep 18, 2026Updated last month
- BioLearns: Computational Biology and Bioinformatics Toolbox in Python☆12Oct 12, 2022Updated 4 years ago
- ☆14Feb 19, 2024Updated 2 years ago
- Pipeline for Universal Mapping of ATAC-seq☆29Sep 23, 2025Updated last year
- ☆45Jan 12, 2026Updated 9 months ago
- Spatial analysis of FISH data☆32Jun 5, 2026Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Analysis of smFISH data☆12Aug 27, 2018Updated 8 years ago
- Reproducibility notebooks for scPoli☆25May 5, 2023Updated 3 years ago
- ☆30Nov 21, 2019Updated 6 years ago
- ☆33Aug 2, 2023Updated 3 years ago
- A Reproducible Untargeted Metabolomics Data Processing Pipeline☆11Mar 18, 2021Updated 5 years ago
- ☆10Oct 7, 2024Updated 2 years ago
- Color Deconvolution for quantification of histological staining☆12Dec 18, 2018Updated 7 years ago
- Spatial Transcriptomics Capture Location Deconvolution☆216Oct 20, 2025Updated last year
- Segmentation-free Analysis of In Situ Capture data☆15Oct 7, 2026Updated 3 weeks ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Reproducibility notebooks for resolVI manuscript☆14Apr 17, 2026Updated 6 months ago
- Spatial One☆32Oct 31, 2024Updated last year
- Lineage Mapper Fiji plugin and MATLAB source code☆19Aug 4, 2022Updated 4 years ago
- Fine-grained Spatial Transcriptomics by integrating paired histology image☆36Aug 7, 2026Updated 2 months ago
- Join subcellular Visium HD bins into cells☆147Sep 14, 2026Updated last month
- R implementation of integration metrics for single-cell data☆14Sep 23, 2026Updated last month
- ☆14Mar 20, 2021Updated 5 years ago
- Splits fastq files evenly☆24Aug 19, 2020Updated 6 years ago
- code repository for Lagattuta et al. "Repertoire analyses reveal T cell receptor sequence features that influence T cell fate." Nat. Imm.…☆15Jan 28, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 4 years ago
- The benchmarking of spatial transcriptomics deconvolution methods☆35Feb 24, 2023Updated 3 years ago
- Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology☆135May 29, 2025Updated last year
- LIANA: a LIgand-receptor ANalysis frAmework☆253Aug 7, 2024Updated 2 years ago
- An R/Bioconductor package to identify higher-order molecular phenotypes☆19Jan 15, 2024Updated 2 years ago
- Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial …☆491Jan 22, 2026Updated 9 months ago
- ☆14Apr 20, 2023Updated 3 years ago