bishwaG / Single-cell-RNA-seq-data-analysis-2018Links
Event page: https://www.csc.fi/web/training/-/single-cell-rnaseq-r-2018
☆13Updated 7 years ago
Alternatives and similar repositories for Single-cell-RNA-seq-data-analysis-2018
Users that are interested in Single-cell-RNA-seq-data-analysis-2018 are comparing it to the libraries listed below
Sorting:
- ☆55Updated 4 years ago
- A repository of pipelines for single-cell data in Nextflow DSL2☆77Updated 2 years ago
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆73Updated 7 years ago
- Capybara: A computational tool to measure cell identity and fate transitions☆59Updated 3 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆81Updated 3 years ago
- ☆34Updated 6 years ago
- Course material in notebook format for learning about single cell bioinformatics methods☆99Updated 9 years ago
- An R toolkit for estimation of cell composition from bulk expression data☆79Updated 4 months ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆55Updated 4 years ago
- Pipeline for processing inDrops sequencing data☆76Updated 7 years ago
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆97Updated 2 years ago
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆123Updated 6 months ago
- ☆60Updated 4 years ago
- ☆70Updated last year
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆85Updated last year
- ☆69Updated 7 years ago
- Pipelines for the analysis of 10x single-cell RNA-sequencing data☆58Updated 2 years ago
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆84Updated 2 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆79Updated 8 months ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 5 years ago
- 10x single cell RNA-seq data from the developing mouse retina☆16Updated 4 years ago
- repository for the single cell RNA-Seq workshop☆30Updated 4 years ago
- Single-cell exploratory data analysis for RNA-Seq☆40Updated 4 years ago
- Repo for Physalia course Analysis of Single Cell RNA-Seq data☆32Updated 6 years ago
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆75Updated 2 years ago
- Material for lecture at the EMBL Single Cell Course 2016☆47Updated 9 years ago
- Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR☆93Updated last month
- R implementation of MULTI-seq sample classification workflow☆64Updated last year
- Fast visualization tool for large-scale and high dimensional single-cell data☆75Updated 2 years ago
- scRNA seq analysis using Seurat V3☆13Updated 4 years ago