A Python package to download neuronal morphologies
☆17Aug 23, 2026Updated last week
Alternatives and similar repositories for morphapi
Users that are interested in morphapi are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Nov 26, 2020Updated 5 years ago
- Visualise brainreg registration output☆10Nov 20, 2021Updated 4 years ago
- General information, resources and dicussions for the BrainGlobe project.☆11Feb 21, 2025Updated last year
- NIU website on common software problems and their troubleshooting☆10Jul 14, 2026Updated last month
- ☆10Mar 15, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Fancier logging with python.☆16Updated this week
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Jan 5, 2024Updated 2 years ago
- Anatomical space conventions made easy.☆12Aug 23, 2026Updated last week
- Build unbiased anatomical templates from individual images☆13Aug 23, 2026Updated last week
- ☆11Oct 21, 2025Updated 10 months ago
- Code for recreating the figures in the brainrender paper (Claudi et al. 2020)☆12Dec 11, 2020Updated 5 years ago
- Re-usable GitHub Action scripts☆14Jul 29, 2026Updated last month
- brainglobe.info website☆14Updated this week
- Loading and saving of image data.☆10Feb 9, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Derotate images acquired via multiphoton calcium imaging☆17Aug 3, 2026Updated 3 weeks ago
- Read and write files from the BrainGlobe neuroanatomy suite☆15Aug 23, 2026Updated last week
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆24Jul 14, 2026Updated last month
- Pose estimation scripts to be run on the SWC HPC cluster☆12Dec 5, 2023Updated 2 years ago
- Segmentation of anatomical structures in a common coordinate space☆36Aug 23, 2026Updated last week
- Standalone cellfinder cell detection algorithm☆20Jan 3, 2024Updated 2 years ago
- A package to manage electrophysiology analysis.☆22Updated this week
- Automated and reproducible analysis of multiphoton imaging datasets☆24Aug 10, 2026Updated 2 weeks ago
- Efficient cell detection in large images using cellfinder in napari☆22Jan 5, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆24Aug 23, 2026Updated last week
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆39Nov 24, 2023Updated 2 years ago
- Mix-and-match computer vision tools for your animal behaviour analysis☆29Aug 3, 2026Updated 3 weeks ago
- Utility to create a basic Python project structure with tests, CI etc.☆39Aug 4, 2026Updated 3 weeks ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆52Aug 23, 2026Updated last week
- A repository for our participation in Google Summer of Code☆13Apr 15, 2025Updated last year
- Tool for the creation, validation and transfer of neuroscience project folders.☆36Aug 3, 2026Updated 3 weeks ago
- Registration to BrainGlobe atlases in napari using Elastix☆32Aug 16, 2026Updated 2 weeks ago
- An R toolbox for analysing movement across space and time☆11Updated this week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Automated 3D brain registration with support for multiple species and atlases.☆149Updated this week
- A pipeline built on napari that enables segmentation, detection, and tracking of animals in behavioral setups.☆19Updated this week
- Store for video frames and metadata. Seekable & scaleable☆11Feb 20, 2026Updated 6 months ago
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 4 years ago
- A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.☆14Jun 3, 2026Updated 2 months ago
- A Python interface to access neuroanatomical atlases☆185Updated this week
- Standalone utilities for SLEAP pose tracking data.☆23Jul 24, 2026Updated last month