brainglobe / morphapiLinks
A Python package to download neuronal morphologies
☆17Updated 2 weeks ago
Alternatives and similar repositories for morphapi
Users that are interested in morphapi are comparing it to the libraries listed below
Sorting:
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 5 years ago
- Code for recreating the figures in the brainrender paper (Claudi et al. 2020)☆12Updated 5 years ago
- Fancier logging with python.☆14Updated 2 weeks ago
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- ☆10Updated 2 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆46Updated 2 weeks ago
- Re-usable GitHub Action scripts☆13Updated last week
- Fast, volumetric cell detection. In development.☆20Updated last month
- Anatomical space conventions made easy.☆12Updated 2 weeks ago
- Read and write files from the BrainGlobe neuroanatomy suite☆15Updated 2 weeks ago
- Pose estimation scripts to be run on the SWC HPC cluster☆12Updated 2 years ago
- A package to manage electrophysiology analysis.☆22Updated last week
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆19Updated 2 weeks ago
- General information, resources and dicussions for the BrainGlobe project.☆11Updated 9 months ago
- Loading and saving of image data.☆10Updated last year
- NIU website on common software problems and their troubleshooting☆10Updated 3 weeks ago
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆22Updated 2 weeks ago
- Visualise brainreg registration output☆10Updated 4 years ago
- Mix-and-match computer vision tools for your animal behaviour analysis☆22Updated last week
- A repository for our participation in Google Summer of Code☆13Updated 8 months ago
- Segmentation of anatomical structures in a common coordinate space☆34Updated 2 weeks ago
- LISBET Is a Social BEhavior Transformer (LISBET)☆12Updated 2 weeks ago
- Brainways☆22Updated 3 months ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated 2 years ago
- ☆11Updated last month
- Napari plugin for working with video files.☆13Updated 4 months ago
- Standalone utilities for SLEAP pose tracking data.☆20Updated last month
- Build unbiased anatomical templates from individual images☆12Updated this week
- analysis tools for large-scale neural recordings☆16Updated 8 months ago
- Utility to create a basic Python project structure with tests, CI etc.☆35Updated 2 weeks ago