brainglobe / morphapi
A Python package to download neuronal morphologies
☆17Updated this week
Alternatives and similar repositories for morphapi:
Users that are interested in morphapi are comparing it to the libraries listed below
- Code for recreating the figures in the brainrender paper (Claudi et al. 2020)☆12Updated 4 years ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- Loading and saving of image data.☆10Updated last year
- Build unbiased anatomical templates from individual images☆11Updated 3 weeks ago
- Read and write files from the BrainGlobe neuroanatomy suite☆14Updated this week
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- Visualisation and exploration of brain atlases☆9Updated 4 years ago
- Re-usable GitHub Action scripts☆10Updated last week
- ☆10Updated 2 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆40Updated this week
- Pose estimation scripts to be run on the SWC HPC cluster☆12Updated last year
- Fast, volumetric cell detection. In development.☆17Updated last week
- Fancier logging with python.☆12Updated this week
- Visualise brainreg registration output☆10Updated 3 years ago
- Data processing tools for animal behavioural analysis☆17Updated last week
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆22Updated this week
- Utility to create a basic Python project structure with tests, CI etc.☆28Updated this week
- NIU website on common software problems and their troubleshooting☆10Updated 2 months ago
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆19Updated this week
- Segmentation of anatomical structures in a common coordinate space☆32Updated this week
- Registration to BrainGlobe atlases in napari using Elastix☆22Updated this week
- Tools for machine learning of animal behavior☆14Updated last year
- Napari plugin for working with video files.☆12Updated this week
- Brainways☆16Updated last week
- Standalone utilities for SLEAP pose tracking data.☆16Updated last week
- LISBET Is a Social BEhavior Transformer (LISBET)☆11Updated last week
- A repository for our participation in Google Summer of Code☆11Updated 3 weeks ago
- A package to manage electrophysiology analysis.☆22Updated this week
- General information, resources and dicussions for the BrainGlobe project.☆11Updated 2 months ago
- analysis tools for large-scale neural recordings☆14Updated last month