QC and cell type assignment for patch-seq transcriptomics data
☆26May 3, 2024Updated 2 years ago
Alternatives and similar repositories for patchseqtools
Users that are interested in patchseqtools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Multichannel Igor Electrophysiology Suite☆29Updated this week
- Dimensionality-reduction and classification for morphology and electrophysiology☆12Sep 23, 2024Updated last year
- Analysis tools specific to the aiephys multipatch project.☆12Oct 23, 2025Updated 9 months ago
- ☆13Jun 17, 2026Updated last month
- Tools for working with single-neuron morphological reconstructions☆22Apr 16, 2026Updated 3 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A collection of notebooks to provide examples of using Microns-explorer.org datasets☆43May 30, 2024Updated 2 years ago
- Analysis of patch-seq data in pancreatic islets (ND, T2D and T1D)☆11May 9, 2020Updated 6 years ago
- A fast, microcontroller-based dynamic clamp system☆14May 17, 2025Updated last year
- This repository contains code to generate standardized cell type nomenclature from an R "dendrogram".☆13Apr 25, 2022Updated 4 years ago
- python toolkits and GUI for multi-patch whole-cell data analysis and visualization☆24Sep 21, 2025Updated 10 months ago
- Phenotypic variation of transcriptomic cell types in mouse motor cortex☆29Oct 4, 2021Updated 4 years ago
- SanPy is software for whole-cell current clamp analysis.☆14Jul 14, 2026Updated 3 weeks ago
- HPC and queue usage class syllabus☆16Sep 28, 2021Updated 4 years ago
- Optimization of single-cell biophysically detailed models☆16Jul 17, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- General, open-standard schema for cell annotations☆16Jun 16, 2025Updated last year
- Tools for viewing, analyzing, and processing multi-electrode array data.☆23May 1, 2018Updated 8 years ago
- A Graphical User Interface with 3D Visualization features for NEURON simulation enviroment☆30Mar 30, 2026Updated 4 months ago
- Analysis of data produced by cvapipe for the variance paper☆24Dec 23, 2024Updated last year
- ☆15Jun 18, 2024Updated 2 years ago
- Antenna analyzer based on RigExpert Zero II and Arduino☆13Jan 25, 2024Updated 2 years ago
- A NWB-based Dataset and Processing Pipeline of Human Single-Neuron Activity During a Declarative Memory Task☆22Feb 4, 2025Updated last year
- The Hierarchical Data Modeling Framework☆57Updated this week
- This repository serves as a hub for community-driven contributions, documentation, and project tracking of the OpenScope Predictive Proce…☆26Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆46Jun 18, 2026Updated last month
- ☆15Oct 13, 2021Updated 4 years ago
- ☆12Feb 2, 2026Updated 6 months ago
- ☆16Nov 2, 2016Updated 9 years ago
- Control and design of two-photon photostimulation experiments☆18Jan 1, 2024Updated 2 years ago
- Emergent property inference.☆11Jul 6, 2023Updated 3 years ago
- Visualization of multiple tandem mass spectrometry data☆10Jun 15, 2020Updated 6 years ago
- ☆28Sep 22, 2021Updated 4 years ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆69Apr 23, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Cell tracking for longitudinal calcium imaging recordings.☆18Dec 11, 2025Updated 7 months ago
- 'minis' is a software for electrophysiological data analysis. It allows you to detect and analyse spontaneous postsynaptic potetnials/cur…☆12Jul 8, 2026Updated last month
- BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome☆10May 13, 2022Updated 4 years ago
- Documentations of BigNeuron Project progress☆24Feb 3, 2016Updated 10 years ago
- Connectome Reconstruction and Exploration Simple Tool☆21Jan 29, 2024Updated 2 years ago
- Compmake is a non-obtrusive module that provides Makefile-like facilities (including parallel processing) for batch Python applications.☆18Jul 19, 2026Updated 3 weeks ago
- Improved Arduino CAT library for the Yaesu FT817☆17Nov 21, 2025Updated 8 months ago