connectome-neuprint / neuprint-python
Python client utilties for interacting with the neuPrint connectome analysis service
☆32Updated 3 weeks ago
Alternatives and similar repositories for neuprint-python:
Users that are interested in neuprint-python are comparing it to the libraries listed below
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆140Updated last week
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- A collection of notebooks to provide examples of using Microns-explorer.org datasets☆37Updated 11 months ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- spike extraction from calcium signals (Deneux et al., 2016)☆29Updated 5 years ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆66Updated 2 months ago
- A deep learning based method to uncover brain learning rules from behavior or neural experimental data.☆17Updated 4 months ago
- pipeline for volumetric cell segmentation☆12Updated last month
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆73Updated 4 months ago
- Browser-based NWB visualization and DANDI exploration☆57Updated last week
- miniscope analysis pipeline with interactive visualizations☆93Updated 9 months ago
- Calcium Data Extraction and Analysis☆44Updated 2 years ago
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- Tools for working with single-neuron morphological reconstructions☆21Updated last year
- Region Of Interest Classification and Tracking☆18Updated this week
- WIP: Python port of Kilosort2☆51Updated last year
- ☆51Updated 8 months ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated last year
- motion correction☆17Updated 2 years ago
- ☆34Updated last year
- Deconvolution of calcium imaging data☆93Updated 3 months ago
- Histology processing☆65Updated 3 weeks ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 3 weeks ago
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆27Updated last week
- Fast, volumetric cell detection. In development.☆17Updated last week
- a visualization method for neural data☆222Updated last month
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆12Updated 2 weeks ago
- ☆12Updated last month
- Registration of cells across sessions.☆75Updated 8 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆53Updated 3 weeks ago