connectome-neuprint / neuprint-pythonLinks
Python client utilties for interacting with the neuPrint connectome analysis service
☆35Updated 2 months ago
Alternatives and similar repositories for neuprint-python
Users that are interested in neuprint-python are comparing it to the libraries listed below
Sorting:
- A deep learning based method to uncover brain learning rules from behavior or neural experimental data.☆17Updated 10 months ago
- Neurotransmitter prediction from EM.☆14Updated 8 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆152Updated 2 weeks ago
- ☆22Updated last week
- A collection of notebooks to provide examples of using Microns-explorer.org datasets☆37Updated last year
- a visualization method for neural data☆238Updated 6 months ago
- Tools for working with single-neuron morphological reconstructions☆22Updated last year
- spike extraction from calcium signals (Deneux et al., 2016)☆32Updated 5 years ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆81Updated 10 months ago
- pipeline for volumetric cell segmentation☆13Updated last month
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Updated last month
- cell detection in calcium imaging recordings☆407Updated 2 months ago
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆12Updated 3 weeks ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- ☆12Updated 2 months ago
- Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18☆30Updated 6 years ago
- Neuronal Morphology Analysis Tool☆108Updated 8 months ago
- Deconvolution of calcium imaging data☆101Updated 9 months ago
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆16Updated last month
- A Python API for working with Neurodata stored in the NWB Format☆203Updated this week
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆52Updated 2 years ago
- A Python interface to access neuroanatomical atlases☆164Updated 3 weeks ago
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆32Updated 2 weeks ago
- Tools to work with Allen Inst CCF data in matlab☆142Updated 3 months ago
- PYthon Neural Analysis Package☆331Updated this week
- code for reading and processing Allen Institute for Brain Science data☆369Updated last year
- Python library for analysis of neuroanatomical data.☆106Updated last week
- Code accompanying Steinmetz et al., 2019☆60Updated 4 years ago
- IBL core shared libraries☆63Updated last week
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 9 months ago