Conversion of neuroimaging data for display in Neuroglancer
☆31Sep 16, 2025Updated 7 months ago
Alternatives and similar repositories for neuroglancer-scripts
Users that are interested in neuroglancer-scripts are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆25Feb 24, 2026Updated 2 months ago
- The openMINDS core metadata model includes schemas that can be used to describe the general origin, location and content of research prod…☆25Updated this week
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆67Mar 17, 2026Updated last month
- A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.☆14Mar 11, 2026Updated last month
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).☆11Jun 23, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆27Apr 16, 2026Updated last week
- openMINDS comprises a set of metadata models for research products in the field of neuroscience.☆45Nov 8, 2023Updated 2 years ago
- ☆12Mar 25, 2022Updated 4 years ago
- Simple watershed and agglomeration library for affinity graphs.☆29Sep 18, 2025Updated 7 months ago
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated last week
- WebGL-based viewer for volumetric data☆25Updated this week
- ☆53Apr 14, 2026Updated 2 weeks ago
- Python client interface for EBRAINS Collaboratory Drive (Seafile) and Bucket (data-proxy) storage☆11Mar 27, 2026Updated last month
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆21Feb 20, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆44Jul 28, 2025Updated 9 months ago
- High-level Python API for the EBRAINS Knowledge Graph☆13Apr 14, 2026Updated 2 weeks ago
- ☆15Mar 26, 2024Updated 2 years ago
- Code for the remote-access API of the EBRAINS/HBP Neuromorphic Computing Platform☆15Mar 17, 2026Updated last month
- PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…☆18May 18, 2020Updated 5 years ago
- Connectome Reconstruction and Exploration Simple Tool☆21Jan 29, 2024Updated 2 years ago
- A curated list of resources for 3D segmentation of neurites in EM images☆57Mar 11, 2024Updated 2 years ago
- Marching Cubes & Mesh Simplification on multi-label 3D images.☆72Updated this week
- View connectomic data stored in neuPrint☆26Apr 17, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Scripts for building, training and validating CNNs for Connectomics☆12Mar 24, 2023Updated 3 years ago
- The official Jupyterlab extension for conda-store☆16Nov 26, 2024Updated last year
- Read and write Neuroglancer datasets programmatically.☆171Updated this week
- Block-wise task scheduling for large nD volumes.☆32Apr 14, 2026Updated 2 weeks ago
- SharkViewer is a web-based viewer for SWC neuron files. It is written entirely in JavaScript using Three.js.☆24Jan 8, 2023Updated 3 years ago
- A curated list of awesome Janelia software☆17Feb 26, 2025Updated last year
- A unified environment for DNN-based automated segmentation of neuronal EM images☆38Aug 28, 2024Updated last year
- Code and performance tests to demonstrate the COUNTLESS algorithm. https://medium.com/@willsilversmith/countless-high-performance-2x-down…☆10Oct 23, 2019Updated 6 years ago
- ☆10Aug 22, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆12Mar 18, 2024Updated 2 years ago
- ☆20Dec 8, 2022Updated 3 years ago
- ☆28Updated this week
- Biologically-Constrained Graphs for Global Connectomics Reconstruction☆11Feb 9, 2021Updated 5 years ago
- Resources for Heinrich et al., 2021☆19May 28, 2021Updated 4 years ago
- Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight i…☆35Jan 3, 2025Updated last year
- Python scripts to read and write the CREMI hdf5 file format.☆39Mar 21, 2023Updated 3 years ago