BigNeuron / DataLinks
☆16Updated 8 years ago
Alternatives and similar repositories for Data
Users that are interested in Data are comparing it to the libraries listed below
Sorting:
- ☆21Updated 4 years ago
- Python scripts to read and write the CREMI hdf5 file format.☆38Updated 2 years ago
- ☆17Updated 7 years ago
- Simple watershed and agglomeration library for affinity graphs.☆25Updated 8 months ago
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).☆11Updated 4 years ago
- Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Inst…☆70Updated 2 years ago
- PyTorch Connectomics: segmentation toolbox for EM connectomics☆179Updated last month
- ☆19Updated 2 years ago
- Deep Learning for EM Connectomics☆15Updated 2 years ago
- 🌈☆59Updated 4 months ago
- Library for automatic tracking of microtubules in large scale EM datasets.☆9Updated 2 years ago
- Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development☆31Updated 2 years ago
- ☆28Updated last year
- Software for the paper "Fast and robust active neuron segmentation in two-photon calcium imaging using spatio-temporal deep learning," Pr…☆67Updated 5 years ago
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆74Updated 3 years ago
- The mutex watershed for image segmentation.☆67Updated 4 years ago
- A unified environment for DNN-based automated segmentation of neuronal EM images☆37Updated 11 months ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆50Updated 2 weeks ago
- GTree is a brain-wide tool for neuron tracing.☆16Updated 4 years ago
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆41Updated 2 weeks ago
- Distributed segmentation for bio-image-analysis☆38Updated 2 months ago
- simple package for augmentation of n-dimensional arrays☆34Updated 2 years ago
- A curated list of resources for 3D segmentation of neurites in EM images☆53Updated last year
- www.vaa3d.org : download the latest Binary version here https://github.com/Vaa3D/release/releases/tag/v3.200☆42Updated 2 months ago
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆51Updated last year
- Image mapping using the LDDMM algorithm, implemented in tensorflow☆16Updated 3 years ago
- www.vaa3d.org☆110Updated last year
- Biologically-Constrained Graphs for Global Connectomics Reconstruction☆11Updated 4 years ago
- www.vaa3d.org☆79Updated 7 years ago