funkey / nyroglancer
jupyter notebook extension to visualize numpy arrays with the neuroglancer
☆27Updated 6 years ago
Alternatives and similar repositories for nyroglancer:
Users that are interested in nyroglancer are comparing it to the libraries listed below
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated 2 weeks ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆48Updated 2 weeks ago
- Block-wise task scheduling for large nD volumes.☆30Updated last month
- A library to facilitate machine learning on multi-dimensional images.☆82Updated this week
- Python SDK for interacting with the BossDB REST API☆22Updated 3 weeks ago
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆23Updated last week
- Interface that allows versioned access to cloud-backed nD datasets.☆9Updated 6 years ago
- PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…☆18Updated 4 years ago
- SamuROI - Structured analysis of multiple user-defined ROIs, an open source Python-based analysis environment for imaging data.☆17Updated 6 years ago
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Updated 8 years ago
- 3-D imaging visualisation through slicing☆29Updated 3 months ago
- The RPC library used in ImJoy.☆24Updated 9 months ago
- Python module for registering and fusing multi-view microscopy data☆23Updated 2 months ago
- Linking napari layers with Matplotlib plots☆40Updated last week
- ☆12Updated last month
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆16Updated last year
- python tools for BigDataViewer☆22Updated 4 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 8 months ago
- Flood filling networks for segmenting electron microscopy of neural tissue☆23Updated 2 years ago
- website for the napari image viewer☆44Updated this week
- Napari gaming☆17Updated 3 years ago
- A 3D interactivity toolbox for napari☆34Updated 2 weeks ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Updated 6 years ago
- WebGL-based viewer for volumetric data☆23Updated this week
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆34Updated last month
- A fully scalable robust image feature extraction library.☆24Updated this week
- Running ImJoy plugins in Jupyter notebooks☆11Updated 2 years ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated last month
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 3 years ago
- Generate multifunctional and macro recordable GUIs from Python classes☆43Updated this week