funkey / nyroglancer
jupyter notebook extension to visualize numpy arrays with the neuroglancer
☆27Updated 6 years ago
Alternatives and similar repositories for nyroglancer:
Users that are interested in nyroglancer are comparing it to the libraries listed below
- Block-wise task scheduling for large nD volumes.☆29Updated 3 months ago
- A library to facilitate machine learning on multi-dimensional images.☆81Updated last month
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆45Updated this week
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated this week
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆23Updated this week
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 5 months ago
- Python module for registering and fusing multi-view microscopy data☆23Updated last year
- ☆10Updated this week
- Python SDK for interacting with the BossDB REST API☆21Updated 2 months ago
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Updated 8 years ago
- Interface that allows versioned access to cloud-backed nD datasets.☆9Updated 6 years ago
- PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…☆18Updated 4 years ago
- python tools for BigDataViewer☆21Updated last month
- Create movies from series of key-frames in napari.☆38Updated 3 years ago
- WebGL-based viewer for volumetric data☆23Updated this week
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆16Updated last year
- my first baby steps with Napari☆10Updated 5 years ago
- Running compute-intense parts of BigStitcher distributed☆21Updated this week
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆56Updated this week
- ☆37Updated 6 months ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 3 years ago
- 3-D imaging visualisation through slicing☆29Updated 2 weeks ago
- Tools for distributed alignment of massive images☆79Updated 2 weeks ago
- SamuROI - Structured analysis of multiple user-defined ROIs, an open source Python-based analysis environment for imaging data.☆17Updated 5 years ago
- Napari gaming☆17Updated 3 years ago
- Python based viewer for large mulit-dimensional datasets.☆20Updated 5 years ago
- website for the napari image viewer☆44Updated this week
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆12Updated 3 weeks ago
- A fully scalable robust image feature extraction library.☆20Updated last week