funkey / nyroglancerLinks
jupyter notebook extension to visualize numpy arrays with the neuroglancer
☆27Updated 6 years ago
Alternatives and similar repositories for nyroglancer
Users that are interested in nyroglancer are comparing it to the libraries listed below
Sorting:
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated 2 months ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆49Updated last week
- A library to facilitate machine learning on multi-dimensional images.☆83Updated last week
- Python based viewer for large mulit-dimensional datasets.☆20Updated 5 years ago
- Block-wise task scheduling for large nD volumes.☆31Updated 3 months ago
- The RPC library used in ImJoy.☆24Updated 11 months ago
- website for the napari image viewer☆44Updated last week
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Updated 8 years ago
- SamuROI - Structured analysis of multiple user-defined ROIs, an open source Python-based analysis environment for imaging data.☆17Updated 6 years ago
- ☆42Updated last month
- Read and write Neuroglancer datasets programmatically.☆154Updated this week
- TensorFlow Deconvolution for Microscopy Data☆90Updated 3 years ago
- GPU accelerated image/volume processing in Python☆111Updated 2 months ago
- 3-D imaging visualisation through slicing☆30Updated 6 months ago
- General-purpouse camera capture plugin for data streaming to napari☆25Updated last year
- Discover, install, and share napari plugins☆52Updated last month
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆65Updated last week
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆79Updated last week
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆23Updated last week
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆60Updated last week
- Python image segmentation plugin☆31Updated 4 years ago
- Linking napari layers with Matplotlib plots☆40Updated 2 months ago
- Render transformed image tiles☆34Updated this week
- python tools for BigDataViewer☆22Updated 6 months ago
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆16Updated last year
- Easily read and write ome-tiff images in python☆27Updated last year
- Running ImJoy plugins in Jupyter notebooks☆11Updated 2 years ago
- PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…☆18Updated 5 years ago