Python package implementing our method MatchCLOT for multimodal single-cell data integration
☆14May 19, 2023Updated 2 years ago
Alternatives and similar repositories for MatchCLOT
Users that are interested in MatchCLOT are comparing it to the libraries listed below
Sorting:
- ☆10Dec 4, 2023Updated 2 years ago
- Gromov-Wasserstein based optimal transport for aligning single-cell multi-omics data☆78Jan 25, 2024Updated 2 years ago
- Package to design primers for MutaSeq and related methods☆11Jan 15, 2021Updated 5 years ago
- ☆10Jun 25, 2021Updated 4 years ago
- ☆11Dec 17, 2023Updated 2 years ago
- Official implementation of "Meta-Entity Driven Triplet Mining for Aligning Medical Vision-Language Models"☆14Mar 19, 2025Updated 11 months ago
- Code to reproduce the analysis of "Decoding gene regulation in the mouse embryo using single-cell multi-omics""☆40Feb 19, 2026Updated last week
- LaTeX tutorial using Texmaker. This repository follows [Michelle Krummel's Tutorial](https://www.youtube.com/watch?v=SoDv0qhyysQ&list=PL1…☆11Jun 14, 2018Updated 7 years ago
- MCP server for single cell analysis☆12May 15, 2025Updated 9 months ago
- The code Implementation of the paper “Exploring Correlations of Self-Supervised Tasks for Graphs”.☆11May 15, 2024Updated last year
- Our solution (1st/98) for the 2020 challenge proposed by Owkin and hosted by ENS - Collège de France on predicting lung cancer survival t…☆10Dec 15, 2020Updated 5 years ago
- [ICCV' 23] MRM: Masked Relation Modeling for Medical Image Pre-Training with Genetics☆10Oct 28, 2024Updated last year
- Share my knowledge, share my life.☆12Apr 5, 2018Updated 7 years ago
- Website for visualizing predicted drug side-effects using L1000 data (http://maayanlab.net/SEP-L1000/)☆10Apr 15, 2022Updated 3 years ago
- R functions for very fast eigenvector calculation☆11Jan 18, 2023Updated 3 years ago
- Code for Paper Predicting Osteoarthritis Progression via Unsupervised Adversarial Representation Learning☆13Aug 11, 2022Updated 3 years ago
- Deep ConvNet Image Classifier based on Residual Network architecture trained on Caltech 101 Object Dataset☆10May 8, 2024Updated last year
- ☆10Sep 27, 2022Updated 3 years ago
- Repository for the scLiTr (single-cell Lineage Tracing analysis) python package☆15Jan 22, 2026Updated last month
- 抓取优书网的html并快速解析为json格式的数据 ，☆10May 17, 2018Updated 7 years ago
- Supervised cell type identification for scATAC-seq data☆14Aug 23, 2023Updated 2 years ago
- ☆11Aug 22, 2023Updated 2 years ago
- Official pytorch implementation for TVQ-VAE☆12Feb 27, 2024Updated 2 years ago
- ☆11Jun 13, 2024Updated last year
- An python omics data toolkit for the analysis across biological scales☆11Dec 5, 2023Updated 2 years ago
- Graphical modelling with time series data using an ODE model☆12Mar 28, 2022Updated 3 years ago
- ☆12Sep 16, 2024Updated last year
- [NeurIPS'24] Free Lunch in Pathology Foundation Model: Task-specific Model Adaptation with Concept-Guided Feature Enhancement - NeurIPS 2…☆15Nov 19, 2024Updated last year
- Predicting transcription factor binding in single cells through deep learning☆13Oct 14, 2022Updated 3 years ago
- Joint variational Autoencoders for Multimodal Imputation and Embedding (JAMIE)☆15Sep 11, 2025Updated 5 months ago
- Simple scVI implementation☆12Updated this week
- ☆18Nov 11, 2022Updated 3 years ago
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 4 months ago
- Folder corresponding to 2017 summer project at MD Anderson Cancer Center.☆12Nov 14, 2019Updated 6 years ago
- Official implementation of MICCAI2023【Knowledge Boosting: Rethinking Medical Contrastive Vision-Langauge Pre-training】☆16Mar 19, 2024Updated last year
- Code and data sharing of Liu et al. 2023 manuscript☆16Apr 18, 2023Updated 2 years ago
- Scalable framework for comparing metric measure spaces with up to 1M points.☆15Apr 6, 2021Updated 4 years ago
- ☆13Nov 9, 2022Updated 3 years ago
- STREAM2: Fast, scalable, and interactive trajectory analysis of single-cell omics data☆13Apr 1, 2024Updated last year