☆56Oct 29, 2022Updated 3 years ago
Alternatives and similar repositories for cross-modal-autoencoders
Users that are interested in cross-modal-autoencoders are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Jul 31, 2021Updated 5 years ago
- ☆19Sep 13, 2022Updated 4 years ago
- ☆23Jun 17, 2024Updated 2 years ago
- Deep learning for single-cell transcript counts☆91Mar 14, 2025Updated last year
- Ideas, code and results of the 2018 CytoData hackathon☆13Jan 23, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Research Paper: "Graph Contrastive Learning as a Versatile Foundation for Advanced scRNA-seq Data Analysis"☆11Nov 20, 2024Updated last year
- Matilda is a multi-task framework for learning from single-cell multimodal omics data. Matilda leverages the information from the multi-m…☆23Updated this week
- ☆17Jul 8, 2024Updated 2 years ago
- CellDrift: temporal perturbation effects for single cell data☆14Dec 3, 2022Updated 3 years ago
- Single Cell Multi-omics deep clustering☆33Jul 1, 2025Updated last year
- Python package for the creation, manipulation, and learning of Causal DAGs☆164Apr 12, 2023Updated 3 years ago
- ☆36Apr 15, 2025Updated last year
- Code for pmVAE model, seen in ICML CompBio '21☆12Apr 12, 2024Updated 2 years ago
- A public MuSpAn page for community discussions and issue reporting.☆25Sep 2, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A Transformer Model Exploiting Histology Images and Spatial Gene Expression☆22Mar 18, 2025Updated last year
- Segmentation error aware clustering for multiplexed imaging☆19Jan 9, 2025Updated last year
- Code for verifying deep neural feature ansatz☆23May 3, 2023Updated 3 years ago
- Deep joint-leaning single-cell multi-omics model☆16Jun 27, 2022Updated 4 years ago
- Implementation for Phenotype prediction from single-cell RNA-seq data using attention-based neural networks (Bioinformatics 2024).☆13Jul 15, 2024Updated 2 years ago
- ☆13Nov 19, 2023Updated 2 years ago
- Prize-Collecting Steiner Forests for Interactomes☆67Jun 18, 2024Updated 2 years ago
- Code for paired TCR data analysis from TIRTL-seq experiments☆14Nov 24, 2025Updated 10 months ago
- Images and other data from the JUMP Cell Painting Consortium☆192Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- a unified single-cell data integration framework by optimal transport☆40Aug 23, 2026Updated last month
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Jan 11, 2025Updated last year
- an efficient data integration method for multiple spatial transcriptomics data with non- cluster-relevant effects such as the complex batc…☆17Dec 15, 2025Updated 10 months ago
- Diffusion model for gene regulatory network inference.☆30Sep 23, 2026Updated 3 weeks ago
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆23Oct 8, 2025Updated last year
- ☆89Jun 24, 2023Updated 3 years ago
- ☆342Aug 16, 2026Updated 2 months ago
- ☆29Dec 15, 2021Updated 4 years ago
- Supporting data files, documentation, and updated tips for the Cell Painting protocol☆22Dec 3, 2021Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Toolset for training quantitative sequence to function models.☆23Mar 15, 2024Updated 2 years ago
- A neural network framework for predicting the Hi-C chromatin interactions from megabase scale DNA sequence☆33Jan 19, 2026Updated 8 months ago
- AESTETIK: Convolutional autoencoder for learning spot representations from spatial transcriptomics and morphology data☆28Aug 18, 2026Updated last month
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆24Apr 19, 2021Updated 5 years ago
- ☆18Jun 6, 2022Updated 4 years ago
- Exploring how tokenization shapes the performance and generalization of single-cell foundation models.☆21Apr 16, 2026Updated 6 months ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆36Mar 19, 2025Updated last year