AI-sandbox / neural-admixtureLinks
Rapid population clustering with autoencoders
☆78Updated last week
Alternatives and similar repositories for neural-admixture
Users that are interested in neural-admixture are comparing it to the libraries listed below
Sorting:
- Here we present a method to plot the outputs of RFMIX version 2☆27Updated last year
- ☆49Updated last year
- python plotly Circos from VCF☆38Updated last year
- RFMIX - Local Ancestry and Admixture Inference Version 2☆88Updated 2 years ago
- Application of pan-genome for population☆108Updated 10 months ago
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- STITCH - Sequencing To Imputation Through Constructing Haplotypes☆83Updated 3 weeks ago
- PhyloAcc a software to detect the changes of conservation of a genomic region☆32Updated 4 months ago
- A pipeline that accepts a VCF file to run through Admixture☆62Updated 8 months ago
- The hap-ibd program detects identity-by-descent segments in phased genotype data.☆48Updated last year
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆48Updated 5 years ago
- Segmented HAPlotype Estimation and Imputation Tool☆85Updated 3 weeks ago
- Same species annotation lift over pipeline.☆98Updated 2 years ago
- tutorial on pggb☆35Updated 7 months ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆51Updated 5 years ago
- PHAST☆74Updated this week
- Analysis of convergence between organismal traits and DNA/protein sequences☆57Updated 3 weeks ago
- Toolkit for calling structural variants using short or long reads☆108Updated 3 weeks ago
- Genome annotation with PacBio Iso-Seq. Takes raw subreads as input, generate Full Length Non Chemiric (FLNC) sequences and produce a bed …☆45Updated last month
- Fast and accurate coordinate conversion between assemblies☆115Updated 5 months ago
- Simple pileup-based variant caller☆91Updated 4 months ago
- Methylation Phasing for Nanopore Sequencing☆48Updated 2 years ago
- Tools for the analysis of structural variation in genomes☆80Updated last year
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆38Updated 5 months ago
- Snakemake-based workflow for detecting structural variants in genomic data☆80Updated 6 months ago
- SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3☆38Updated 5 years ago
- Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.☆81Updated last week
- A Nextflow workflow to generate lift over files for any pair of genomes☆68Updated 2 months ago
- Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads☆76Updated 5 months ago
- perSVade: personalized Structural Variation detection☆40Updated last month