DeMarcoLab / autolamellaLinks
autolamella is a python package for automated cryo-lamella preparation with focused ion beam milling.
☆19Updated 5 months ago
Alternatives and similar repositories for autolamella
Users that are interested in autolamella are comparing it to the libraries listed below
Sorting:
- A Modular Platform for Streamlining Automated Cryo-FIB Workflows☆25Updated 9 months ago
- SerialEM mdoc files as pandas dataframes☆14Updated 5 months ago
- ☆19Updated last week
- a tool for using surfaces to explore volumetric data in napari☆19Updated 7 months ago
- ☆11Updated last week
- ☆10Updated last month
- Singularity image for cryo-CARE☆37Updated 3 years ago
- automated on-the-fly tilt-series alignment☆11Updated 4 years ago
- SerialEM, Python, and Unity Simulations for Cryo-Electron Tomography and Montage Tomography.☆16Updated last year
- Fourier analysis and subtomogram averaging of heterogenic cylindrical structures☆15Updated 3 weeks ago
- Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.☆29Updated 2 months ago
- Scripts to make cryo-electron tomography a bit easier☆14Updated 5 months ago
- Read MRC format image files into napari using the mrcfile package from CCP-EM☆19Updated last year
- IMOD model files as pandas dataframes in Python☆11Updated 6 months ago
- cryo-EM tomogram simulator☆29Updated last week
- A possible schema for cryoET geometry metadata☆11Updated 4 months ago
- ☆50Updated last year
- PIP package of cryoCARE☆44Updated last year
- ☆33Updated 2 years ago
- Miscellaneous scripts for processing cryo-ET data☆18Updated 10 months ago
- ☆14Updated 2 months ago
- A tool to support interactive machine learning for cryoET data☆12Updated last year
- Self-supervised deep learning framework for CryoET analysis☆17Updated 2 weeks ago
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆28Updated 6 months ago
- membrane segmentation in 3D for cryo-ET☆84Updated last month
- SmartScope is a framework for systematic evaluation of cryo-EM specimens☆17Updated 8 months ago
- A universal API for FIBSEM control☆30Updated 6 months ago
- Parallel cryo electron tomography via beam image shift☆40Updated 3 weeks ago
- motion correction for movies recorded using direct electron detectors☆14Updated 8 years ago
- CryoSPARC is the state-of-the-art platform used globally for obtaining 3D structural information from single particle cryo-EM data. The …☆13Updated 4 months ago