zou-group / CellVoyagerLinks
☆83Updated last week
Alternatives and similar repositories for CellVoyager
Users that are interested in CellVoyager are comparing it to the libraries listed below
Sorting:
- ☆123Updated 4 months ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆73Updated 5 months ago
- Cell2Sentence: Teaching Large Language Models the Language of Biology☆189Updated 2 months ago
- BioDiscoveryAgent is an LLM-based AI agent for closed-loop design of genetic perturbation experiments☆85Updated last month
- ☆73Updated this week
- Agent self-driven repository on bio-agent papers, i.e. papers on LLM-based agents in biology and medicine.☆61Updated this week
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆56Updated 3 months ago
- ☆72Updated last year
- ☆135Updated last year
- Computational Optimization of DNA Activity (CODA)☆60Updated 4 months ago
- Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.☆72Updated 2 months ago
- GeneCompass☆86Updated 2 months ago
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆140Updated 6 months ago
- single cell foundation model☆97Updated this week
- Utilizing single-cell omics from patients tumor to predict response and resistance.☆71Updated 2 years ago
- Generalizable AI predicts immunotherapy outcomes across cancers and treatments☆37Updated this week
- ☆21Updated 7 months ago
- ☆47Updated last month
- LLM agents for working with the SRA and associated bioinformatics databases.☆115Updated last month
- Knowledge-primed neural networks☆38Updated 2 years ago
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆50Updated 2 weeks ago
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆56Updated 8 months ago
- Comprehensive suite for evaluating perturbation prediction models☆71Updated last week
- Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifical…☆74Updated 2 weeks ago
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data☆120Updated 2 months ago
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation☆44Updated last month
- CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets☆60Updated 10 months ago
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆27Updated 3 weeks ago
- CpGPT: a Foundation Model for DNA Methylation.☆48Updated last month
- Backend library for conversational AI in biomedicine☆178Updated last month