maranasgroup / CatPredLinks
Machine Learning models for in vitro enzyme kinetic parameter prediction
☆64Updated 7 months ago
Alternatives and similar repositories for CatPred
Users that are interested in CatPred are comparing it to the libraries listed below
Sorting:
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆164Updated 8 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆51Updated this week
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆82Updated 4 months ago
- code for IDR binding paper 2025☆61Updated 9 months ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆150Updated 2 years ago
- Protein folding in Pymol☆127Updated 2 weeks ago
- ☆142Updated 4 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆68Updated 5 months ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆103Updated last week
- ☆118Updated 5 months ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆165Updated 2 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆46Updated last month
- ☆92Updated last month
- ☆134Updated 3 years ago
- ☆83Updated 2 weeks ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆74Updated last month
- A generalized enzyme kinetics parameter prediction model.☆71Updated 2 months ago
- Official repository of GENzyme☆58Updated last year
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆78Updated 3 months ago
- ☆61Updated last month
- ☆225Updated 3 months ago
- A bunch of shell utilities for dealing the silent files☆72Updated last week
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆26Updated 9 months ago
- ☆87Updated last year
- An accurate and trainable end-to-end protein-ligand docking framework☆117Updated 8 months ago
- ☆75Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆127Updated 3 weeks ago
- Predicting high-fitness mutations based on protein inverse folding models☆68Updated 2 months ago
- This repository contains the positive-unlabeled learning-based enzyme promiscuity prediction model as described in the paper Deep learnin…