SysBioChalmers / DLKcatLinks
Deep learning and Bayesian approach applied to enzyme turnover number for the improvement of enzyme-constrained genome-scale metabolic models (ecGEMs) reconstruction
☆162Updated last year
Alternatives and similar repositories for DLKcat
Users that are interested in DLKcat are comparing it to the libraries listed below
Sorting:
- ☆165Updated 3 years ago
- Bilingual Language Model for Protein Sequence and Structure☆247Updated 5 months ago
- ☆73Updated last year
- Tutorials, cheat sheets, and other resources for computational methods for protein design.☆112Updated last year
- Antibody Numbering and Antigen Receptor ClassIfication☆213Updated last year
- ☆313Updated 9 months ago
- Protein folding in Pymol☆108Updated 4 months ago
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆284Updated 4 months ago
- Code for ColabDock paper☆140Updated last month
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆312Updated 7 months ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆125Updated 3 years ago
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆255Updated 2 months ago
- Protein hallucination and inpainting with RoseTTAFold☆259Updated 2 years ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆171Updated 3 months ago
- ☆114Updated 2 years ago
- A compilation of deep learning methods for protein design☆97Updated 2 years ago
- ☆276Updated last week
- Predict the binding affinity of protein-protein complexes from structural data☆133Updated last month
- ☆128Updated 7 months ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆150Updated last year
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.☆162Updated 8 months ago
- Official repo of the modular BioExcel version of HADDOCK☆158Updated this week
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆141Updated last month
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆156Updated 3 months ago
- ☆108Updated 10 months ago
- Rifdock Library for Conformational Search☆158Updated last year
- Predict the structure of immune receptor proteins☆137Updated 4 months ago
- Application to assign secondary structure to proteins☆200Updated last week
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆99Updated 10 months ago
- Making Protein Modeling Accessible to All Biologists☆113Updated last week