🧬 - Data management and modeling framework based on EnzymeML.
☆26Feb 23, 2026Updated 4 months ago
Alternatives and similar repositories for PyEnzyme
Users that are interested in PyEnzyme are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 🏍️ - JAX-based framework to model biological systems☆17Jun 21, 2026Updated last week
- ☆17Jun 15, 2022Updated 4 years ago
- A thin wrapper around ProteinMPNN for convenient sampling without having to write out or consume files☆13Apr 29, 2024Updated 2 years ago
- 🏛- Library used to access and handle the Dataverse installation DaRUS of the University of Stuttgart.☆10Jul 18, 2022Updated 3 years ago
- A generalized enzyme kinetics parameter prediction model.☆94Oct 2, 2025Updated 8 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- 🪐 - Lightweight Dataverse interface in Python to upload, download and update datasets found in Dataverse installations.☆28Nov 27, 2025Updated 7 months ago
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆31Aug 9, 2024Updated last year
- Repository for libCellML development.☆18Updated this week
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆44Jun 28, 2021Updated 5 years ago
- ☆23Jun 10, 2025Updated last year
- ☆21Oct 31, 2024Updated last year
- ☆13Jul 14, 2023Updated 2 years ago
- ☆22Dec 15, 2022Updated 3 years ago
- ☆80Sep 12, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- FLYCOP (FLexible sYnthetic Consortium OPtimization)☆12Sep 24, 2018Updated 7 years ago
- GUI for Boltz☆35Jun 11, 2025Updated last year
- Uncover organisms' metabolic blueprints☆17Jun 18, 2024Updated 2 years ago
- Implementation of the HERMES workflow☆34Updated this week
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆136Nov 17, 2021Updated 4 years ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 4 months ago
- Enabling Cross-Origin Resource Sharing (CORS) for Fetch Requests within Tauri applications.☆25Jan 21, 2026Updated 5 months ago
- bakerlab pymol scripts☆27Feb 6, 2020Updated 6 years ago
- An accurate and efficient protein sequence design approach☆26Mar 16, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A domain parser for Alphafold models☆49Dec 12, 2023Updated 2 years ago
- ML-guided enzyme engineering☆83Apr 13, 2026Updated 2 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆188Jun 8, 2026Updated 3 weeks ago
- ☆26Apr 2, 2026Updated 2 months ago
- A Python package for peptide sequence analysis built around ProForma 2.1 notation. Calculate masses, generate fragments, predict isotopic…☆17May 22, 2026Updated last month
- Python library to run structure based model (SBM) simulations using the OpenMM toolkit☆23Jan 16, 2026Updated 5 months ago
- Implementation and replication of ProGen, Language Modeling for Protein Generation, in Jax☆114Sep 8, 2021Updated 4 years ago
- ☆30May 24, 2024Updated 2 years ago
- Read chromatography and mass spectrometry binary files.☆60Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Python based Graphical User Interface for generating input files for and running molecular dynamic simulation.☆10Aug 27, 2024Updated last year
- deep protein solubility prediction☆42May 12, 2019Updated 7 years ago
- The HERMES project repository, mostly used to capture meta elements at project level and do project management.☆12Dec 18, 2024Updated last year
- ☆11Nov 11, 2023Updated 2 years ago
- fastsolv python package, website, and paper code☆48Aug 27, 2025Updated 10 months ago
- Reaction-Conditioned Virtual Screening of Enzymes☆45Jun 13, 2026Updated 2 weeks ago
- Workflow to download, process, and explore microbial RNA-seq data from NCBI SRA☆18Feb 29, 2024Updated 2 years ago