EnzymeML / PyEnzymeLinks
𧬠- Data management and modeling framework based on EnzymeML.
β26Updated this week
Alternatives and similar repositories for PyEnzyme
Users that are interested in PyEnzyme are comparing it to the libraries listed below
Sorting:
- Python interface for the RCSB PDB search API.β65Updated 8 months ago
- Protein Structure Analysisβ63Updated 2 months ago
- β26Updated 2 years ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.β34Updated 3 years ago
- A high performance drop-in replacement for Biotite's PDBFile.β41Updated 6 months ago
- Source code and examples for AlphaFold Unmaskedβ75Updated 2 weeks ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptidesβ83Updated last month
- Library containing code to manipulate mmCIF and PDB filesβ36Updated last week
- A Rust implementation of the LightDock macromolecular docking softwareβ29Updated last year
- Framework for the rapid modeling glycans and glycoproteins.β31Updated 2 years ago
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysisβ62Updated last month
- A Unified Approach to Protein Engineeringβ42Updated last year
- β85Updated 3 weeks ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.β41Updated 2 years ago
- Python package to atom map, correct and suggest enzymatic reactionsβ39Updated last year
- Python package to manage protein structures and their annotationsβ45Updated last year
- Fast and accurate protein structure predictionβ56Updated 10 months ago
- The DSSP building softwareβ47Updated 2 years ago
- Collection of useful bioinformatic functions and tools for various computational biology pipelinesβ36Updated last week
- Parametric Building of de novo Functional Topologiesβ44Updated 3 years ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPyβ96Updated 6 months ago
- AlphaFill is an algorithm based on sequence and structure similarity that βtransplantsβ missing compounds to the AlphaFold models. By addβ¦β110Updated 2 weeks ago
- A generic mechanism for describing views used in molecular visualizationsβ55Updated 2 weeks ago
- Sandbox for Deep-Learning based Computational Protein Designβ119Updated this week
- The official codebase of peptidy, a peptide processing tool for machine learning.β36Updated 7 months ago
- PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.β82Updated 9 months ago
- Tutorial on how to use Ginkgo AI embedding APIs for scientific problemsβ19Updated last year
- An open-source library for the analysis of protein interactions.β33Updated 4 years ago
- GTalign, high-performance protein structure alignment, superposition and searchβ52Updated 3 months ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimerβ59Updated 3 months ago