EnzymeML / PyEnzymeLinks
𧬠- Data management and modeling framework based on EnzymeML.
β26Updated last week
Alternatives and similar repositories for PyEnzyme
Users that are interested in PyEnzyme are comparing it to the libraries listed below
Sorting:
- β26Updated 2 years ago
- Python interface for the RCSB PDB search API.β65Updated 10 months ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.β34Updated 3 years ago
- β87Updated 2 months ago
- Fast protein structure searching or your money backβ118Updated last week
- Source code and examples for AlphaFold Unmaskedβ76Updated 2 months ago
- Protein Structure Analysisβ63Updated 3 months ago
- A NumPy port of the foldseek code for encoding protein structures to 3di.β79Updated 5 months ago
- Python package to manage protein structures and their annotationsβ45Updated last year
- Fast and accurate protein structure predictionβ57Updated last year
- pyPept: a python library to generate atomistic 2D and 3D representations of peptidesβ85Updated 2 months ago
- scripts and facilities for in-silico mutagenesis with FoldXβ65Updated 3 weeks ago
- A generic mechanism for describing views used in molecular visualizationsβ57Updated last week
- Sandbox for Deep-Learning based Computational Protein Designβ120Updated last month
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysisβ63Updated 2 months ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.β41Updated 2 years ago
- Fast indexing and search of discontinuous motifs in protein structuresβ112Updated this week
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure predβ¦β66Updated 4 months ago
- The DSSP building softwareβ50Updated 2 years ago
- Python package to atom map, correct and suggest enzymatic reactionsβ41Updated last year
- A Rust implementation of the LightDock macromolecular docking softwareβ29Updated last year
- 2D portraits of 3D protein structuresβ27Updated 3 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metricsβ72Updated last month
- Physicochemical properties, indices and descriptors for amino-acid sequences.β112Updated 4 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequenceβ63Updated 9 months ago
- Tutorial on how to use Ginkgo AI embedding APIs for scientific problemsβ19Updated last year
- AlphaLink: Integrating crosslinking MS data into OpenFoldβ72Updated 2 years ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPyβ97Updated 7 months ago
- A Python parser for the BRENDA databaseβ33Updated 2 years ago
- A high performance drop-in replacement for Biotite's PDBFile.β41Updated 8 months ago