☆12Jul 10, 2022Updated 3 years ago
Alternatives and similar repositories for DecoMetDIA
Users that are interested in DecoMetDIA are comparing it to the libraries listed below
Sorting:
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆18Nov 14, 2023Updated 2 years ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Sep 6, 2022Updated 3 years ago
- R package for MetFrag☆24Sep 25, 2017Updated 8 years ago
- Code associated with the manuscript: Deep Neural Networks for Classification of LC-MS Spectral Peaks☆14Jan 11, 2021Updated 5 years ago
- R package for optimized LC-MS spectra processing☆27Feb 12, 2026Updated 2 weeks ago
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆34Aug 19, 2021Updated 4 years ago
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆31Dec 19, 2024Updated last year
- Network mapping tool for metabolomics + data.☆54Feb 5, 2016Updated 10 years ago
- Assigning precursor-product ion relationships in indiscriminant MS/MS data☆13Updated this week
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆51Aug 28, 2023Updated 2 years ago
- Annotation of in source LC/MS data☆12Oct 19, 2024Updated last year
- rMSI processing methods using C++☆11Dec 3, 2021Updated 4 years ago
- ☆28Nov 30, 2023Updated 2 years ago
- TidyMS: Tools for working with MS data in untargeted metabolomics☆60Jul 13, 2024Updated last year
- Mass spectral library manager☆13Apr 9, 2020Updated 5 years ago
- A "fairly fast" ISOtope PAttern Calculator for Python☆13Sep 27, 2023Updated 2 years ago
- R interface to Chemical Translation Service (CTS)☆17Jul 27, 2024Updated last year
- R MSI Tools☆15Nov 29, 2021Updated 4 years ago
- Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.☆17May 8, 2024Updated last year
- Implementation of graph convolutional networks to predict chromatographic retention times.☆15Sep 7, 2021Updated 4 years ago
- ☆15Jun 3, 2021Updated 4 years ago
- GC/LC-MS data analysis for environmental science☆17May 20, 2025Updated 9 months ago
- ☆17Nov 19, 2025Updated 3 months ago
- This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…☆16Jan 21, 2021Updated 5 years ago
- Knowledge-guided multilayer network approach is executed in MetDNA2☆16Nov 5, 2022Updated 3 years ago
- Supplementary material for the paper "Improved batch correction in untargeted MS-based metabolomics" by R. Wehrens, et al. Metabolomics, …☆15Nov 13, 2018Updated 7 years ago
- ☆15Oct 4, 2021Updated 4 years ago
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆21Feb 14, 2021Updated 5 years ago
- PeakBot - detection of chromatographic and mz profile-mode peaks in LC-HRMS data☆22Feb 9, 2022Updated 4 years ago
- Flash entropy search☆16Sep 24, 2023Updated 2 years ago
- ☆16Jul 20, 2022Updated 3 years ago
- Implementation of a deep learning model for peak detection in chromatograms.☆22Mar 22, 2022Updated 3 years ago
- R Package for Systematic Optimization of Metabolomic Data Processing☆17Apr 4, 2025Updated 10 months ago
- MZmine 2 source code repository☆138May 5, 2024Updated last year
- Reference pipeline for FDR-controlled metabolite annotation for imaging mass spectrometry☆21Nov 15, 2016Updated 9 years ago
- Interactive software to analyze and browse mass spectrometry data☆21Jul 3, 2025Updated 7 months ago
- Official code repository for the paper READRetro: Natural Product Biosynthesis Planning with Retrieval-Augmented Dual-View Retrosynthesis☆22Jun 8, 2024Updated last year
- asari, metabolomics data preprocessing☆59Jan 29, 2026Updated last month
- MetNormalizer is used to normalize large scale metabolomics data.☆22Mar 3, 2021Updated 4 years ago