A Julia package for reconstructing the vector field components; potential, divergence, curl and Jacobian matrix in a data manifold (approximated attracting manifold) using sampled velocities.
☆18Jun 23, 2026Updated 3 weeks ago
Alternatives and similar repositories for ddHodge.jl
Users that are interested in ddHodge.jl are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Modeling Latent Flow Structure using Hodge Decomposition☆17Mar 13, 2025Updated last year
- Inferring multi-modality dynamics for single cell genomics data☆14Dec 18, 2025Updated 7 months ago
- ☆18Mar 31, 2026Updated 3 months ago
- RECODE - resolution of curse of dimensionality in single-cell data analysis☆24Mar 31, 2026Updated 3 months ago
- ☆15Aug 5, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- R package for generalized binary covariance decomposition.☆16Jul 13, 2025Updated last year
- ☆14Apr 2, 2025Updated last year
- Multivariate stochastic modeling for transcriptional dynamics with cell-specific latent time using SDEvelo☆21Jan 28, 2025Updated last year
- An R package with wrappers and pipelines for single cell RNA-seq analysis☆14Jul 10, 2026Updated last week
- Difference in Intercellular Communication from scRNA-seq data☆25Oct 14, 2025Updated 9 months ago
- Non-parametric density inference for single-cell analysis.☆75Jun 29, 2026Updated 3 weeks ago
- ☆51May 18, 2026Updated 2 months ago
- ☆31Jul 7, 2026Updated 2 weeks ago
- ☆14May 1, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Bayesian model for RNA velocity estimation of periodic manifolds☆35Jun 25, 2024Updated 2 years ago
- ☆18Dec 4, 2025Updated 7 months ago
- ScoMAP is an R package to spatially integrate single-cell omics data into virtual cells and infer enhancer-to-gene relationships.☆30Oct 4, 2021Updated 4 years ago
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆22Oct 8, 2025Updated 9 months ago
- A comprehensive tool to infer TF-centred, spatial gene regulatory networks for the spatially resolved transcriptomic data.☆22Apr 27, 2025Updated last year
- a deep generative model for single-cell survival analysis☆26Dec 2, 2025Updated 7 months ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆27Oct 17, 2024Updated last year
- GENOT: Generative Neural Optimal Transport☆16Dec 18, 2024Updated last year
- Scatterbar - data visualization for proportional data across many spatially resolved coordinates☆12Mar 3, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Variational Estimation of Latent Velocity from Expression with Time-resolution☆13May 30, 2024Updated 2 years ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆21May 13, 2026Updated 2 months ago
- ☆14Updated this week
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆31Oct 24, 2024Updated last year
- Library for managing, storage, viewing, and working with spatial transcriptomics data using Imglib2, N5, BigDataViewer and Fiji.☆32May 27, 2025Updated last year
- A python implementation of scran computeSumFactors: normalization by deconvolution for single-cell RNA-sequencing☆35Nov 4, 2023Updated 2 years ago
- Einstein Summation for Arrays in R☆12Jul 8, 2026Updated last week
- SPM in Julia☆13Sep 1, 2023Updated 2 years ago
- EasyFigAssembler simplifies the assembly of publication-quality scientific figures. It helps free scientists from technical burdens, so w…☆32Dec 28, 2025Updated 6 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- R Interface to CVODE/CVODES/IDA functions in the SUNDIALS ODE solving C library☆11Updated this week
- ☆28Mar 12, 2026Updated 4 months ago
- Scalable framework for comparing metric measure spaces with up to 1M points.☆16Apr 6, 2021Updated 5 years ago
- Cellsnake tool main repo☆35Feb 22, 2024Updated 2 years ago
- Clone of the Bioconductor repository for the TileDBArray package.☆11Apr 10, 2026Updated 3 months ago
- ☆14May 7, 2025Updated last year
- http://a-terada.github.com/lamp/☆14Jul 14, 2023Updated 3 years ago