Code for InstructBioMol, implementing the Nature Machine Intelligence paper "Advancing Biomolecular Understanding and Design Following Human Instructions".
☆31Aug 2, 2025Updated 10 months ago
Alternatives and similar repositories for InstructBioMol
Users that are interested in InstructBioMol are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RetroDFM-R: Reasoning-Driven Retrosynthesis Prediction with Large Language Models via Reinforcement Learning☆23Nov 22, 2025Updated 6 months ago
- ☆12Jan 25, 2026Updated 4 months ago
- ☆18Jan 19, 2026Updated 4 months ago
- ☆23Mar 2, 2025Updated last year
- Code and Data for the paper: Graph Sampling-based Meta-Learning for Molecular Property Prediction [IJCAI2023]☆20Jun 29, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆43Sep 24, 2025Updated 8 months ago
- SIU: A Million-Scale Structural Small Molecule-Protein Interaction Dataset for Unbiased Bioactivity Prediction☆17Feb 17, 2025Updated last year
- AI for Chemical Spectra☆18Updated this week
- Code and data for the Nature Machine Intelligence paper "Knowledge graph-enhanced molecular contrastive learning with functional prompt".☆137Mar 18, 2024Updated 2 years ago
- This is the official implementation of the paper: Fractional Denoising for 3D Molecular Pre-training☆22Mar 30, 2024Updated 2 years ago
- Code and data for the ACL2024 paper "InstructProtein: Aligning Human and Protein Language via Knowledge Instruction".☆23Aug 28, 2024Updated last year
- ☆28Sep 9, 2025Updated 9 months ago
- Predictive Chemistry Augmented with Text Retrieval☆26Feb 20, 2024Updated 2 years ago
- Protein representation and design under a single training scheme☆24May 17, 2026Updated 3 weeks ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆38Feb 5, 2026Updated 4 months ago
- Learning to Group Auxiliary Datasets for Molecule, NeurIPS2023☆18Dec 19, 2023Updated 2 years ago
- Official Code Repository for the paper "Mol-LLaMA: Towards General Understanding of Molecules in Large Molecular Language Model"☆32Sep 30, 2025Updated 8 months ago
- Pytorch version of Continuous Language Generative Flow (ACL 2021)☆11Sep 14, 2021Updated 4 years ago
- Differential Evolution Algorithm which uses Non-dominated Sorting for Multi-Objective Optimization☆10Mar 11, 2020Updated 6 years ago
- Prot2Text-V2: Protein Function Prediction with Multimodal Contrastive Alignment☆46Oct 23, 2025Updated 7 months ago
- Generative modeling of molecular dynamics trajectories☆218Mar 22, 2026Updated 2 months ago
- Flexibility-conditioned protein structure design☆36Mar 10, 2026Updated 3 months ago
- NeurIPS24: Aligning Target-Aware Molecule Diffusion Models with Exact Energy Optimization☆43Apr 2, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12May 12, 2025Updated last year
- The official code of "Beyond Walking: A Large-Scale Image-Text Benchmark for Text-based Person Anomaly Search"☆30Sep 15, 2025Updated 8 months ago
- This Code is for Fragment-wise 3D Structure-based Molecular Generation with Reliable Geometry☆35Mar 24, 2025Updated last year
- Official code release for Ambient Protein Diffusion☆35Aug 30, 2025Updated 9 months ago
- Pytorch implementation of "Very Deep Graph Neural Networks via Noise Regularisation"☆10Aug 22, 2021Updated 4 years ago
- Counterfactual generation of tumor perturbations from multiplexed tissue images☆24May 13, 2025Updated last year
- A hybrid pipeline to screen compounds with DrugCLIP and Schrodinger☆58Jun 2, 2026Updated last week
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆18May 2, 2021Updated 5 years ago
- GeoSSL: Molecular Geometry Pretraining with SE(3)-Invariant Denoising Distance Matching, ICLR'23 (https://openreview.net/forum?id=CjTHVo1…☆48Jul 27, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Source code for the paper 'Uncovering Neural Scaling Laws in Molecular Representation Learning' (NeurIPS 2023 Datasets and Benchmarks).☆14Dec 2, 2023Updated 2 years ago
- A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)☆107Jan 11, 2025Updated last year
- This is the repository for the NeurIPS-21 paper [Contrastive Graph Poisson Networks: Semi-Supervised Learning with Extremely Limited Labe…☆12Feb 28, 2023Updated 3 years ago
- ☆11Aug 2, 2023Updated 2 years ago
- Scientific Large Language Models: A Survey on Biological & Chemical Domains☆356Sep 7, 2025Updated 9 months ago
- ChatCell: Facilitating Single-Cell Analysis with Natural Language☆51Jun 5, 2025Updated last year
- Official implementation of Aquatic-GS: A Hybrid 3D Representation for Underwater Scenes☆19Oct 23, 2024Updated last year