wrpearson / fasta36
Git repository for FASTA36 sequence comparison software
☆117Updated 2 months ago
Related projects ⓘ
Alternatives and complementary repositories for fasta36
- RNA secondary structure/sequence profiles for homology search and alignment☆101Updated 2 weeks ago
- Alignment viewer for linux terminal☆115Updated 2 months ago
- sensitive and precise assembly of short sequencing reads☆149Updated last month
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆122Updated 4 years ago
- Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, e…☆213Updated this week
- Logan Unitigs and Contigs☆102Updated this week
- Sequana: a set of Snakemake NGS pipelines☆145Updated last month
- Fast and flexible ORF finder☆62Updated 2 years ago
- a python package for fast random access to sequences from plain and gzipped FASTA/Q files☆268Updated 4 months ago
- A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0☆178Updated this week
- antiSMASH☆188Updated 3 weeks ago
- Using Deep Learning to predict gene annotations☆169Updated this week
- Download files from NCBI Entrez by accession☆111Updated 2 months ago
- Webserver and command line tool for annotating engineered plasmids☆108Updated 7 months ago
- ☆117Updated 2 months ago
- Simple oligo analysis and primer design☆169Updated 2 months ago
- A brief, quick and dirty introduction to Sequence Similarity Networks☆19Updated last year
- Plugins for the Ensembl Variant Effect Predictor (VEP)☆141Updated 2 weeks ago
- Pipeline for metabolic annotation of microbial genomes☆140Updated 4 months ago
- PAired-eND Assembler for DNA sequences☆129Updated 3 years ago
- Protein 3D structure prediction pipeline☆58Updated last week
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.☆78Updated 2 years ago
- Public repository for ShapeMapper 2 releases☆30Updated 9 months ago
- snakemake pipeline for creating trees from sequence sets☆69Updated 2 weeks ago
- WebLogo 3: Sequence Logos redrawn☆147Updated 3 weeks ago
- Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)☆149Updated 2 months ago
- What should perfect bioinformatic tools be like?☆103Updated 8 months ago
- Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks☆160Updated this week
- breseq is a computational pipeline for finding mutations relative to a reference sequence in short-read DNA resequencing data. It is inte…☆149Updated 3 weeks ago
- Python programs for processing GFF3 files☆95Updated 7 months ago