astheeggeggs / PHESANTLinks
PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank
☆19Updated 3 years ago
Alternatives and similar repositories for PHESANT
Users that are interested in PHESANT are comparing it to the libraries listed below
Sorting:
- ☆72Updated last week
- Repo for the R package coloc☆171Updated 3 weeks ago
- High-definition likelihood inference of genetic correlations (HDL)☆121Updated 2 months ago
- Visualization of Colocalization Between eQTL and GWAS Data☆84Updated 3 years ago
- Hypothesis Prioritisation in multi-trait Colocalization☆54Updated last year
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆115Updated 2 years ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆55Updated 4 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆33Updated 2 months ago
- R script to make Manhattan-style plot for TWAS☆39Updated 4 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆34Updated 2 months ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆52Updated 3 months ago
- corrplot of LDSC genetic correlation results☆53Updated 3 years ago
- Meta-analysis of genomewide association scans☆60Updated last year
- ☆36Updated 4 years ago
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆70Updated 4 years ago
- GWAS Summary Statistics Data Harmonisation☆23Updated 2 months ago
- R interface to the IEU GWAS database API☆98Updated 3 weeks ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆86Updated this week
- R package for CAUSE☆56Updated last year
- ☆57Updated 7 months ago
- methods for functional summary-based imputation☆87Updated 3 years ago
- Software for estimating correlation of trait effect sizes across populations☆47Updated 2 months ago
- Partners Biobank genomics data QC☆30Updated 5 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆41Updated 7 years ago
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆68Updated 2 months ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆37Updated 6 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆67Updated 10 months ago
- GWAS for survival analysis in large cohorts☆21Updated last year
- LD Score Regression in R☆48Updated last week